Ing4 (inhibitor of growth family member 4) - Rat Genome Database

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Gene: Ing4 (inhibitor of growth family member 4) Chinchilla lanigera
Analyze
Symbol: Ing4
Name: inhibitor of growth family member 4
RGD ID: 8930253
Description: ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K16 acetyltransferase activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); genetic disease (ortholog); Hyperphosphatemic Familial Tumoral Calcinosis 1 (ortholog); FOUND IN cytosol (ortholog); histone acetyltransferase complex (ortholog); intermediate filament cytoskeleton (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: inhibitor of growth family, member 4; inhibitor of growth protein 4
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554134,263,647 - 4,274,476 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554134,263,647 - 4,274,476 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Ing4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554134,263,647 - 4,274,476 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554134,263,647 - 4,274,476 (-)NCBIChiLan1.0ChiLan1.0
ING4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,650,301 - 6,663,119 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl126,650,301 - 6,663,142 (-)EnsemblGRCh38hg38GRCh38
GRCh37126,759,467 - 6,772,285 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,629,707 - 6,642,565 (-)NCBINCBI36Build 36hg18NCBI36
Build 34126,629,706 - 6,642,565NCBI
Celera128,376,682 - 8,389,327 (-)NCBICelera
Cytogenetic Map12p13.31NCBI
HuRef126,613,009 - 6,625,613 (-)NCBIHuRef
CHM1_1126,758,703 - 6,771,307 (-)NCBICHM1_1
T2T-CHM13v2.0126,660,668 - 6,673,486 (-)NCBIT2T-CHM13v2.0
Ing4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396125,016,811 - 125,026,228 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6125,016,723 - 125,026,228 (+)EnsemblGRCm39 Ensembl
GRCm386125,039,848 - 125,049,265 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6125,039,760 - 125,049,265 (+)EnsemblGRCm38mm10GRCm38
MGSCv376124,989,866 - 124,999,282 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366125,005,467 - 125,014,883 (+)NCBIMGSCv36mm8
Celera6126,709,558 - 126,718,979 (+)NCBICelera
Cytogenetic Map6F2NCBI
cM Map659.17NCBI
Ing4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84159,528,183 - 159,536,762 (+)NCBIGRCr8
mRatBN7.24157,841,882 - 157,850,519 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4157,841,951 - 157,850,265 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4164,070,998 - 164,079,555 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04159,853,920 - 159,862,473 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04158,490,206 - 158,498,766 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04157,554,729 - 157,563,353 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4157,554,794 - 157,563,352 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04224,572,418 - 224,581,191 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44161,161,044 - 161,169,603 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14161,405,965 - 161,414,284 (+)NCBI
Celera4146,578,911 - 146,587,470 (+)NCBICelera
Cytogenetic Map4q42NCBI
ING4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21012,213,323 - 12,225,950 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11212,210,081 - 12,222,630 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0126,782,402 - 6,795,035 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1126,698,842 - 6,710,955 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl126,698,843 - 6,710,955 (-)Ensemblpanpan1.1panPan2
ING4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12738,371,656 - 38,379,251 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2738,371,766 - 38,379,029 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,237,208 - 8,244,736 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02738,725,270 - 38,732,113 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12738,598,523 - 38,606,055 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02738,640,052 - 38,647,581 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,716,102 - 7,723,646 (-)NCBIUU_Cfam_GSD_1.0
Ing4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945102,472,892 - 102,480,697 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367091,140,345 - 1,149,843 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367091,140,485 - 1,147,982 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ING4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl564,027,855 - 64,036,773 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1564,027,789 - 64,036,671 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2566,541,628 - 66,546,214 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ING4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1116,683,994 - 6,696,888 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl116,684,897 - 6,696,852 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660631,528,890 - 1,541,474 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ing4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248603,353,489 - 3,362,430 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248603,353,443 - 3,362,541 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000021401   ⟹   ENSCLAP00000021200
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554134,263,647 - 4,274,476 (-)Ensembl
RefSeq Acc Id: XM_005378800   ⟹   XP_005378857
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554134,263,647 - 4,274,476 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005378801   ⟹   XP_005378858
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554134,263,647 - 4,274,476 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005378802   ⟹   XP_005378859
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554134,263,647 - 4,274,476 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005378803   ⟹   XP_005378860
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554134,263,647 - 4,274,476 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013511346   ⟹   XP_013366800
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554134,263,647 - 4,274,476 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013511347   ⟹   XP_013366801
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554134,263,647 - 4,274,476 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013511348   ⟹   XP_013366802
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554134,263,647 - 4,274,173 (-)NCBI
Sequence:
RefSeq Acc Id: XP_005378860   ⟸   XM_005378803
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_005378859   ⟸   XM_005378802
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_005378858   ⟸   XM_005378801
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_005378857   ⟸   XM_005378800
- Peptide Label: isoform X3
- UniProtKB: A0A8C2W309 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013366801   ⟸   XM_013511347
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013366800   ⟸   XM_013511346
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013366802   ⟸   XM_013511348
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: ENSCLAP00000021200   ⟸   ENSCLAT00000021401
Protein Domains
PHD-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000014519 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000021401 ENTREZGENE
  ENSCLAT00000021401.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
  6.10.140.1740 UniProtKB/TrEMBL
InterPro ING_fam UniProtKB/TrEMBL
  ING_N_histone-binding UniProtKB/TrEMBL
  Zinc_finger_PHD-type_CS UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_PHD-finger UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene Ing4 ENTREZGENE
PANTHER INHIBITOR OF GROWTH PROTEIN 4 UniProtKB/TrEMBL
  PTHR10333 UniProtKB/TrEMBL
Pfam ING UniProtKB/TrEMBL
PROSITE ZF_PHD_1 UniProtKB/TrEMBL
  ZF_PHD_2 UniProtKB/TrEMBL
SMART ING UniProtKB/TrEMBL
  PHD UniProtKB/TrEMBL
Superfamily-SCOP SSF57903 UniProtKB/TrEMBL
UniProt A0A8C2W309 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Ing4  inhibitor of growth family member 4    inhibitor of growth family, member 4  Symbol and/or name change 5135510 APPROVED