Symbol:
Strbp
Name:
spermatid perinuclear RNA binding protein
RGD ID:
8925212
Description:
ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); microtubule binding (ortholog); INVOLVED IN cell motility (ortholog); mechanosensory behavior (ortholog); spermatid development (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN manchette (ortholog); microtubule cytoskeleton (ortholog); nucleus (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955419 4,795,953 - 4,852,398 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955419 4,732,467 - 4,858,872 (+) NCBI ChiLan1.0 ChiLan1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Strbp Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955419 4,795,953 - 4,852,398 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955419 4,732,467 - 4,858,872 (+) NCBI ChiLan1.0 ChiLan1.0
STRBP Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 9 123,109,494 - 123,268,586 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 9 123,109,500 - 123,268,586 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 9 125,883,548 - 126,030,865 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 9 124,927,139 - 125,070,664 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 9 122,966,873 - 123,110,397 NCBI Celera 9 96,532,171 - 96,615,626 (-) NCBI Celera Cytogenetic Map 9 q33.3 NCBI HuRef 9 95,498,948 - 95,645,951 (-) NCBI HuRef CHM1_1 9 126,032,225 - 126,179,120 (-) NCBI CHM1_1 T2T-CHM13v2.0 9 135,300,815 - 135,465,770 (-) NCBI T2T-CHM13v2.0
Strbp Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 2 37,459,880 - 37,593,890 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 2 37,373,240 - 37,593,871 (-) Ensembl GRCm39 Ensembl GRCm38 2 37,569,868 - 37,703,878 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 2 37,483,228 - 37,703,859 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 2 37,425,388 - 37,502,805 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 2 37,305,237 - 37,469,228 (-) NCBI MGSCv36 mm8 Celera 2 37,255,231 - 37,332,594 (-) NCBI Celera Cytogenetic Map 2 B NCBI cM Map 2 24.19 NCBI
Strbp Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 41,738,096 - 41,879,054 (-) NCBI GRCr8 mRatBN7.2 3 21,328,310 - 21,467,753 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 21,337,855 - 21,414,949 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 24,809,843 - 24,883,207 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 33,394,801 - 33,468,169 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 31,205,741 - 31,279,169 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 21,817,680 - 21,956,988 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 21,828,298 - 21,904,270 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 27,058,852 - 27,186,405 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 17,338,337 - 17,411,975 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 3 17,235,208 - 17,308,204 (-) NCBI Celera 3 19,776,985 - 19,850,280 (-) NCBI Celera Cytogenetic Map 3 q11 NCBI
STRBP Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 11 16,081,061 - 16,239,600 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 9 16,083,338 - 16,235,943 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 9 94,249,017 - 94,395,796 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 9 122,581,566 - 122,645,198 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 9 122,586,575 - 122,640,167 (-) Ensembl panpan1.1 panPan2
STRBP Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 9 59,543,172 - 59,689,035 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 9 59,614,129 - 59,689,032 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 9 58,737,579 - 58,884,344 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 9 60,462,224 - 60,609,435 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 9 60,461,624 - 60,609,432 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 9 59,220,684 - 59,367,486 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 9 59,536,175 - 59,682,512 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 9 59,628,568 - 59,775,402 (+) NCBI UU_Cfam_GSD_1.0
Strbp Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404947 191,823,427 - 191,927,414 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936487 11,592,008 - 11,647,098 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936487 11,579,002 - 11,647,078 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
STRBP Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 1 264,045,669 - 264,195,883 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 1 264,030,135 - 264,195,908 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 1 297,496,762 - 297,560,978 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
STRBP Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 12 14,944,447 - 15,023,703 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 12 14,948,763 - 15,011,359 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666079 1,045,539 - 1,201,312 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Strbp
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSCLAT00000015913 ⟹ ENSCLAP00000015750
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955419 4,795,953 - 4,852,398 (+) Ensembl
Ensembl Acc Id:
ENSCLAT00000015914 ⟹ ENSCLAP00000015751
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 Ensembl NW_004955419 4,799,737 - 4,851,811 (+) Ensembl
RefSeq Acc Id:
XM_005382505 ⟹ XP_005382562
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955419 4,732,467 - 4,852,398 (+) NCBI
Sequence:
GACCTTACCCCTGTGGTCAGGCACCATGCTGTTCCCTTCCGTGTACGGCATCTTCAGAACCCTGAGGACAGTTTCACCAAGAGGTGTATTCCAGAGAAAAGTCTTCAAACATCTTTGCTGTATTTGAT
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RefSeq Acc Id:
XM_013513147 ⟹ XP_013368601
Type:
CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955419 4,732,475 - 4,856,005 (+) NCBI
Sequence:
CCCTGTGGTCAGGCACCATGCTGTTCCCTTCCGTGTACGGCATCTTCAGAACCCTGAGGACAGT
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RefSeq Acc Id:
XR_001233576
Type:
NON-CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955419 4,732,475 - 4,856,005 (+) NCBI
Sequence:
CCCTGTGGTCAGGCACCATGCTGTTCCCTTCCGTGTACGGCATCTTCAGAACCCTGAGGACAGTTTCACCAAGAGGTGTATTCCAGAGAAAAGTCTTCAAACATCTTTGCTGTATTTGATGCTGAGTG
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RefSeq Acc Id:
XR_260609
Type:
NON-CODING
Position:
Chinchilla Assembly Chr Position (strand) Source ChiLan1.0 NW_004955419 4,732,475 - 4,858,872 (+) NCBI
Sequence:
CCCTGTGGTCAGGCACCATGCTGTTCCCTTCCGTGTACGGCATCTTCAGAACCCTGAGGACAGTTTCACCAAGAGGTGTATTCCAGAGAAAAGTCTTCAAACATCTTTGCTGTATTTGATGCTGAGTG
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RefSeq Acc Id:
XP_005382562 ⟸ XM_005382505
- Peptide Label:
isoform X1
- UniProtKB:
A0A8C2VLM9 (UniProtKB/TrEMBL), A0A8C2VPE8 (UniProtKB/TrEMBL)
- Sequence:
MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWLDETNRGTKTEGETDMKKDEAVENYSKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKDKPTETLLNTVKDNLPIQ
hide sequence
RefSeq Acc Id:
XP_013368601 ⟸ XM_013513147
- Peptide Label:
isoform X2
- UniProtKB:
A0A8C2VPE8 (UniProtKB/TrEMBL)
- Sequence:
MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWLDETNRGTKTEGETDM
hide sequence
Ensembl Acc Id:
ENSCLAP00000015750 ⟸ ENSCLAT00000015913
Ensembl Acc Id:
ENSCLAP00000015751 ⟸ ENSCLAT00000015914
