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Gene: Ankrd16 (ankyrin repeat domain 16) Chinchilla lanigera

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Symbol:

Ankrd16

Name:

ankyrin repeat domain 16

RGD ID:

8891070

Description:

INVOLVED IN tRNA modification (ortholog); ASSOCIATED WITH hypoparathyroidism-deafness-renal disease syndrome (ortholog); schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ankyrin repeat domain-containing protein 16

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955421	22,521,284 - 22,534,873 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955421	22,520,707 - 22,535,618 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hypoparathyroidism-deafness-renal disease syndrome (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

tRNA modification (ISO)

Cellular Component

cytoplasm (ISO)

nucleus (ISO)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Ankrd16
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955421	22,521,284 - 22,534,873 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955421	22,520,707 - 22,535,618 (-)	NCBI	ChiLan1.0	ChiLan1.0

ANKRD16
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	5,861,616 - 5,889,893 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	5,861,616 - 5,889,906 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	5,903,579 - 5,931,856 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	5,943,695 - 5,971,352 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	10	5,834,082 - 5,862,252 (-)	NCBI		Celera
Cytogenetic Map	10	p15.1	NCBI
HuRef	10	5,830,571 - 5,858,661 (-)	NCBI		HuRef
CHM1_1	10	5,903,658 - 5,931,846 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	5,862,155 - 5,890,421 (-)	NCBI		T2T-CHM13v2.0

Ankrd16
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	11,781,902 - 11,795,138 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	11,782,687 - 11,795,140 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	11,777,753 - 11,790,327 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	11,777,876 - 11,790,329 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	11,699,380 - 11,711,952 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	11,696,430 - 11,699,117 (+)	NCBI		MGSCv36	mm8
Celera	2	11,695,297 - 11,707,870 (+)	NCBI		Celera
Cytogenetic Map	2	A1	NCBI
cM Map	2	9.05	NCBI

Ankrd16
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	71,645,171 - 71,658,377 (-)	NCBI		GRCr8
mRatBN7.2	17	66,735,325 - 66,748,533 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	66,737,261 - 66,748,533 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	70,220,672 - 70,233,898 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	74,049,489 - 74,062,715 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	68,092,487 - 68,105,713 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	70,384,883 - 70,398,089 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	70,386,707 - 70,398,769 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	72,089,017 - 72,102,223 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	77,930,658 - 77,943,867 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	77,943,506 - 77,954,647 (-)	NCBI
Celera	17	66,240,588 - 66,253,794 (-)	NCBI		Celera
Cytogenetic Map	17	q12.2	NCBI

ANKRD16
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	18,414,582 - 18,443,526 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	18,419,913 - 18,448,840 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	5,902,950 - 5,931,101 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	5,887,294 - 5,915,357 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	5,887,294 - 5,916,076 (-)	Ensembl	panpan1.1		panPan2

ANKRD16
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	30,095,941 - 30,105,739 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	30,095,548 - 30,105,212 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	27,126,616 - 27,136,219 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	30,477,215 - 30,486,820 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	30,476,993 - 30,486,293 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	27,574,028 - 27,583,629 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	28,410,328 - 28,419,940 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	29,128,660 - 29,138,265 (+)	NCBI		UU_Cfam_GSD_1.0

Ankrd16
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	32,524,952 - 32,535,512 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936484	8,690,090 - 8,701,499 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936484	8,690,183 - 8,700,705 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ANKRD16
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	65,109,086 - 65,122,186 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	65,109,043 - 65,149,416 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	71,224,784 - 71,260,761 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ANKRD16
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	5,969,869 - 5,997,795 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	5,984,250 - 5,997,657 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666051	11,272,882 - 11,301,382 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ankrd16
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624775	772,908 - 787,505 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624775	772,192 - 788,276 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005383851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013513667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013513668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01022138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01022139	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01350347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000009951 ⟹ ENSCLAP00000009822

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955421	22,521,284 - 22,534,873 (-)	Ensembl

RefSeq Acc Id:

XM_005383851 ⟹ XP_005383908

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955421	22,520,707 - 22,535,615 (-)	NCBI

Sequence:

show sequence

CCGTCCTCGCTTCTGTTGCGCGGAGGAGAAAAGGGGAAACTTTCCCAGAGTTCCTTCCAGCTGC
CCGGGTCCCCAAAGGGGGTGAATAGCAGCAGCGGGGAGGGGCGGGCGCGGCTGCCTTTTGGTGA
GGACGGGGTGGCGCGAGAGAACACCGCTCCGTCCCGGAGAGGCCTGACAGGGTCGGGCTGGAGC
AGCGGGAGGCGCAGGAGCGCCGTGGCCCTGCAGTCACCCCTAGGCCAGGCTGCCGGGGCGCACA
CCTCGCCCCGCCCGCTGCCTGCGGAGCTGCCCCCGCCGGGCGCGTCCTTCCCGCCGCGGGGCTT
TCAGGTGGCAGCGACCCGCCTCCCTGACGTTTTCTCCCCGTGCGCGGGGCCGGCCCGGAGTATC
AGATGCACCCACTAGCCGAGCCGCACGGGGGTACACCGAGGCCCAGGGCTGCACCGAGACGACC
GCACCCGGAGCGCGGGAGCAGGAGCGGTCCACAGGCGCGCTCTGCGCCGGCTGTCCCGTCCCCC
TGAGGAATCAGCGGCCACAGCCGGGACCAGGGACCCGCCCCCCGAGGGGCAAAGGGCGTGAGTG
CCGCGGGCGGCCCGGGCAGTGGGCACCCGGGCCGAGGGCGGCGCGTCTGGGAGGGTCACGTGCA
GGAACCGGAAGCCCGGCCACCTGCGCGGTTCACTCGGCCTGCTGGGCCCGTGTCCCCTGGCCGA
GGGCTGGGACTCGGCGTCCCTCCCGCCCGCTCGCGGCCATGGCCACGCCCGGGGACTCGCGGCG
CCTCTTCAGACTGGTGCAGGAGGGCCGGCTTCGCGCCCTGCGGGAGCAGCTGCAGGCCGCCGGA
GGCCCCCAGGGCTTGGCGGGAGACACCCTGCTGCACTGTGCCGCCCGCCATGGACGCCGGGACA
CCCTAGCCTATCTGGTGGAAGCCTGGGGCATGGACATCGAGGCTGCCAACCGAGACTACAAGAG
GCCTCTGCACGAGGCGGCCGCCATGGGACACCGGGACTGCGTGTGCTACCTGCTGGATCGAGGG
GCGTCCGTGGACTGCCTGAAGAAGGCCGATTGGACTCCTCTAATGATGGCTTGCACAAGAAAGA
ATCTCGAGGTGATCCAGGACCTTGTGGAACATGGTGCCAATCCACTCCTCAAGAACAAAGACGG
CTGGAACAGTTTCCACATTGCCAGTCGAGAAGGTGACCCTCTGATCCTCCAGTACTTGCTCACT
GTTTGCCCAGATGCTTGGAAGACAGAGAGCAAAATTAGAAGAACTCCTCTGCACACTGCAGCAA
TGCATGGCTGTTTAGAAGCAGTCAAGGTGCTTCTTACAAGGTGCCAGTATGAACCCGACTGCAA
AGACAGCTGTGGTATTACCCCCTTCATGGACGCAATTCAGTGTGGTCACATCGACATAGCCAGG
CTGCTCCTCGAAACACATGAGGCTTGCCCTTCAGCTGAGGACAACCTGGGGGCCCAGGCGCTGC
ACAGGGCAGCGGTCACTGGGCAGGATGAAGCCATCCAGTTTTTGGTGTCCGATCTTGGCATCAA
TGTAGATGTGAGAGCAGCAACAACCCACCTCACAGCGCTTCACTATGCAGCTAAGGAAGGGCAT
ACAAGCACAGTTCAGACTCTCTTATCCTTGGGTGCTGACATCCATGCTAAAGATGGAAGACATC
GATCAGCCCTGCATCTGGCCTGTGCAGGCCAGCACTCGGCTTGCGCTGAGTTTCTCCTGCAGTC
CGGCCTGAAGGATTCCGAAGACGTAACGGGCACCCTGGCTCAGCAGCTTGCAAAGAGAGCAGAC
GTCCTTCAGGGTTTCAACCACAGCCCCGTGACGTAAGAACGTTCCTAAAGGGAGATAATAAAGT
GTGTGCGAGTTCATACGCTGCGTCTTACGTCACTAACAGAGTCAGTAAAATTCCTCAGTGTGCA
GCATTTTCGTCTCCTCCTGCTTCCCCCCTGCACTCTCCTCTTCCACGGGGGTGTCCCAGGTGAC
CAGCACTGGGTTCCCAGCCTGTGCCTGGCAGGTTGTAAGATCCACAGTGCAGGCAGAGTCTTTC
CCTAGTCCATATTTCACTTCTTTCACCCTAAAAGGAGAATTAGATAATATTGATGAAGTTAGTT
TCTGGAATCTTTAGAAAGACATCTAACATACATAAATACAAGATACACACTTTTATAAATATAT
GTACGTGTGTTGCAATATTGTATGGTAAGCGGATGAAGATATTTAAAATATAAATTGCTGTTAA
CTAGAGCCGTAAGATATAATTGATCTGTTTTAATTTCTCCCTTCATAGGCTTTTACTTTTCCAT
TACCATGGTCCACTTCTGGTTTCATAGCCGGGAGGGAAATGTTTATTATCTGTTTCCACAGAAA
TGTACTAGGGATTAATGAAAACTTTTCTAATTAAACTATAAA

hide sequence

RefSeq Acc Id:

XM_013513667 ⟹ XP_013369121

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955421	22,520,707 - 22,535,616 (-)	NCBI

Sequence:

show sequence

CCCGTCCTCGCTTCTGTTGCGCGGAGGAGAAAAGGGGAAACTTTCCCAGAGTTCCTTCCAGCTG
CCCGGGTCCCCAAAGGGGGTGAATAGCAGCAGCGGGGAGGGGCGGGCGCGGCTGCCTTTTGGTG
AGGACGGGGTGGCGCGAGAGAACACCGCTCCGTCCCGGAGAGGCCTGACAGGGTCGGGCTGGAG
CAGCGGGAGGCGCAGGAGCGCCGTGGCCCTGCAGTCACCCCTAGGCCAGGCTGCCGGGGCGCAC
ACCTCGCCCCGCCCGCTGCCTGCGGAGCTGCCCCCGCCGGGCGCGTCCTTCCCGCCGCGGGGCT
TTCAGGTGGCAGCGACCCGCCTCCCTGACGTTTTCTCCCCGTGCGCGGGGCCGGCCCGGAGTAT
CAGATGCACCCACTAGCCGAGCCGCACGGGGGTACACCGAGGCCCAGGGCTGCACCGAGACGAC
CGCACCCGGAGCGCGGGAGCAGGAGCGGTCCACAGGCGCGCTCTGCGCCGGCTGTCCCGTCCCC
CTGAGGAATCAGCGGCCACAGCCGGGACCAGGGACCCGCCCCCCGAGGGGCAAAGGGCGTGAGT
GCCGCGGGCGGCCCGGGCAGTGGGCACCCGGGCCGAGGGCGGCGCGTCTGGGAGGGTCACGTGC
AGGAACCGGAAGCCCGGCCACCTGCGCGGTTCACTCGGCCTGCTGGGCCCGTGTCCCCTGGCCG
AGGGCTGGGACTCGGCGTCCCTCCCGCCCGCTCGCGGCCATGGCCACGCCCGGGGACTCGCGGC
GCCTCTTCAGACTGGTGCAGGAGGGCCGGCTTCGCGCCCTGCGGGAGCAGCTGCAGGCCGCCGG
AGGCCCCCAGGGCTTGGCGGGAGACACCCTGCTGCACTGTGCCGCCCGCCATGGACGCCGGGAC
ACCCTAGCCTATCTGGTGGAAGCCTGGGGCATGGACATCGAGGCTGCCAACCGAGACTACAAGA
GGCCTCTGCACGAGGCGGCCGCCATGGGACACCGGGACTGCGTGTGCTACCTGCTGGATCGAGG
GGCGTCCGTGGACTGCCTGAAGAAGGCCGATTGCTTGTCACAGAATGAAGTGCCTGCCTTCGAG
AAAGTCCTGATCTCCTGGGAATCAGAAACACGGAAGAGGGCTGGGGGTGCAGCTGAGTGGTACA
CTGAGCCTAAGCTTGTCCTGGTTGGCTTTAGGACTCCTCTAATGATGGCTTGCACAAGAAAGAA
TCTCGAGGTGATCCAGGACCTTGTGGAACATGGTGCCAATCCACTCCTCAAGAACAAAGACGGC
TGGAACAGTTTCCACATTGCCAGTCGAGAAGGTGACCCTCTGATCCTCCAGTACTTGCTCACTG
TTTGCCCAGATGCTTGGAAGACAGAGAGCAAAATTAGAAGAACTCCTCTGCACACTGCAGCAAT
GCATGGCTGTTTAGAAGCAGTCAAGGTGCTTCTTACAAGGTGCCAGTATGAACCCGACTGCAAA
GACAGCTGTGGTATTACCCCCTTCATGGACGCAATTCAGTGTGGTCACATCGACATAGCCAGGC
TGCTCCTCGAAACACATGAGGCTTGCCCTTCAGCTGAGGACAACCTGGGGGCCCAGGCGCTGCA
CAGGGCAGCGGTCACTGGGCAGGATGAAGCCATCCAGTTTTTGGTGTCCGATCTTGGCATCAAT
GTAGATGTGAGAGCAGCAACAACCCACCTCACAGCGCTTCACTATGCAGCTAAGGAAGGGCATA
CAAGCACAGTTCAGACTCTCTTATCCTTGGGTGCTGACATCCATGCTAAAGATGGAAGACATCG
ATCAGCCCTGCATCTGGCCTGTGCAGGCCAGCACTCGGCTTGCGCTGAGTTTCTCCTGCAGTCC
GGCCTGAAGGATTCCGAAGACGTAACGGGCACCCTGGCTCAGCAGCTTGCAAAGAGAGCAGACG
TCCTTCAGGGTTTCAACCACAGCCCCGTGACGTAAGAACGTTCCTAAAGGGAGATAATAAAGTG
TGTGCGAGTTCATACGCTGCGTCTTACGTCACTAACAGAGTCAGTAAAATTCCTCAGTGTGCAG
CATTTTCGTCTCCTCCTGCTTCCCCCCTGCACTCTCCTCTTCCACGGGGGTGTCCCAGGTGACC
AGCACTGGGTTCCCAGCCTGTGCCTGGCAGGTTGTAAGATCCACAGTGCAGGCAGAGTCTTTCC
CTAGTCCATATTTCACTTCTTTCACCCTAAAAGGAGAATTAGATAATATTGATGAAGTTAGTTT
CTGGAATCTTTAGAAAGACATCTAACATACATAAATACAAGATACACACTTTTATAAATATATG
TACGTGTGTTGCAATATTGTATGGTAAGCGGATGAAGATATTTAAAATATAAATTGCTGTTAAC
TAGAGCCGTAAGATATAATTGATCTGTTTTAATTTCTCCCTTCATAGGCTTTTACTTTTCCATT
ACCATGGTCCACTTCTGGTTTCATAGCCGGGAGGGAAATGTTTATTATCTGTTTCCACAGAAAT
GTACTAGGGATTAATGAAAACTTTTCTAATTAAACTATAAA

hide sequence

RefSeq Acc Id:

XM_013513668 ⟹ XP_013369122

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955421	22,525,340 - 22,535,618 (-)	NCBI

Sequence:

show sequence

GCCCCGTCCTCGCTTCTGTTGCGCGGAGGAGAAAAGGGGAAACTTTCCCAGAGTTCCTTCCAGC
TGCCCGGGTCCCCAAAGGGGGTGAATAGCAGCAGCGGGGAGGGGCGGGCGCGGCTGCCTTTTGG
TGAGGACGGGGTGGCGCGAGAGAACACCGCTCCGTCCCGGAGAGGCCTGACAGGGTCGGGCTGG
AGCAGCGGGAGGCGCAGGAGCGCCGTGGCCCTGCAGTCACCCCTAGGCCAGGCTGCCGGGGCGC
ACACCTCGCCCCGCCCGCTGCCTGCGGAGCTGCCCCCGCCGGGCGCGTCCTTCCCGCCGCGGGG
CTTTCAGGTGGCAGCGACCCGCCTCCCTGACGTTTTCTCCCCGTGCGCGGGGCCGGCCCGGAGT
ATCAGATGCACCCACTAGCCGAGCCGCACGGGGGTACACCGAGGCCCAGGGCTGCACCGAGACG
ACCGCACCCGGAGCGCGGGAGCAGGAGCGGTCCACAGGCGCGCTCTGCGCCGGCTGTCCCGTCC
CCCTGAGGAATCAGCGGCCACAGCCGGGACCAGGGACCCGCCCCCCGAGGGGCAAAGGGCGTGA
GTGCCGCGGGCGGCCCGGGCAGTGGGCACCCGGGCCGAGGGCGGCGCGTCTGGGAGGGTCACGT
GCAGGAACCGGAAGCCCGGCCACCTGCGCGGTTCACTCGGCCTGCTGGGCCCGTGTCCCCTGGC
CGAGGGCTGGGACTCGGCGTCCCTCCCGCCCGCTCGCGGCCATGGCCACGCCCGGGGACTCGCG
GCGCCTCTTCAGACTGGTGCAGGAGGGCCGGCTTCGCGCCCTGCGGGAGCAGCTGCAGGCCGCC
GGAGGCCCCCAGGGCTTGGCGGGAGACACCCTGCTGCACTGTGCCGCCCGCCATGGACGCCGGG
ACACCCTAGCCTATCTGGTGGAAGCCTGGGGCATGGACATCGAGGCTGCCAACCGAGACTACAA
GAGGCCTCTGCACGAGGCGGCCGCCATGGGACACCGGGACTGCGTGTGCTACCTGCTGGATCGA
GGGGCGTCCGTGGACTGCCTGAAGAAGGCCGATTGCTTGTCACAGAATGAAGTGCCTGCCTTCG
AGAAAGTCCTGATCTCCTGGGAATCAGAAACACGGAAGAGGGCTGGGGGTGCAGCTGAGTGGTA
CACTGAGCCTAAGCTTGTCCTGGTTGGCTTTAGGACTCCTCTAATGATGGCTTGCACAAGAAAG
AATCTCGAGGTGATCCAGGACCTTGTGGAACATGGTGCCAATCCACTCCTCAAGAACAAAGACG
GCTGGAACAGTTTCCACATTGCCAGTCGAGAAGGTGACCCTCTGATCCTCCAGTACTTGCTCAC
TGTTTGCCCAGATGCTTGGAAGACAGAGAGCAAAATTAGAAGAACTCCTCTGCACACTGCAGCA
ATGCATGGCTGTTTAGAAGCAGTCAAGGTGCTTCTTACAAGGTGCCAGTATGAACCCGACTGCA
AAGACAGCTGTGGTATTACCCCCTTCATGGACGCAATTCAGTGTGGTCACATCGACATAGCCAG
GCTGCTCCTCGAAACACATGAGGCTTGCCCTTCAGCTGAGGACAACCTGGGGGCCCAGGCGCTG
CACAGGGCAGCGGTCACTGGGCAGGATGAAGCCATCCAGTTTTTGGTGTCCGATCTTGGCATCA
ATGTAGATGTGAGAGCAGCAACAACCCACCTCACAGCGCTTCACTATGCAGCTAAGTGGTAATG
AATTTATTTCAACACTCAGGAAGGGCATACAAGCACAGTTCAGACTCTCTTATCCTTGGGTGCT
GACATCCATGCTAAAGATG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005383908	(Get FASTA)	NCBI Sequence Viewer
	XP_013369121	(Get FASTA)	NCBI Sequence Viewer
	XP_013369122	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000009822
	ENSCLAP00000009822.1

RefSeq Acc Id:	XP_005383908 ⟸ XM_005383851
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2V9U4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATPGDSRRLFRLVQEGRLRALREQLQAAGGPQGLAGDTLLHCAARHGRRDTLAYLVEAWGMDI EAANRDYKRPLHEAAAMGHRDCVCYLLDRGASVDCLKKADWTPLMMACTRKNLEVIQDLVEHGA NPLLKNKDGWNSFHIASREGDPLILQYLLTVCPDAWKTESKIRRTPLHTAAMHGCLEAVKVLLT RCQYEPDCKDSCGITPFMDAIQCGHIDIARLLLETHEACPSAEDNLGAQALHRAAVTGQDEAIQ FLVSDLGINVDVRAATTHLTALHYAAKEGHTSTVQTLLSLGADIHAKDGRHRSALHLACAGQHS ACAEFLLQSGLKDSEDVTGTLAQQLAKRADVLQGFNHSPVT hide sequence

RefSeq Acc Id:	XP_013369121 ⟸ XM_013513667
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V9U4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATPGDSRRLFRLVQEGRLRALREQLQAAGGPQGLAGDTLLHCAARHGRRDTLAYLVEAWGMDI EAANRDYKRPLHEAAAMGHRDCVCYLLDRGASVDCLKKADCLSQNEVPAFEKVLISWESETRKR AGGAAEWYTEPKLVLVGFRTPLMMACTRKNLEVIQDLVEHGANPLLKNKDGWNSFHIASREGDP LILQYLLTVCPDAWKTESKIRRTPLHTAAMHGCLEAVKVLLTRCQYEPDCKDSCGITPFMDAIQ CGHIDIARLLLETHEACPSAEDNLGAQALHRAAVTGQDEAIQFLVSDLGINVDVRAATTHLTAL HYAAKEGHTSTVQTLLSLGADIHAKDGRHRSALHLACAGQHSACAEFLLQSGLKDSEDVTGTLA QQLAKRADVLQGFNHSPVT hide sequence

RefSeq Acc Id:

XP_013369122 ⟸ XM_013513668

- Peptide Label:

isoform X3

- Sequence:

show sequence

MATPGDSRRLFRLVQEGRLRALREQLQAAGGPQGLAGDTLLHCAARHGRRDTLAYLVEAWGMDI
EAANRDYKRPLHEAAAMGHRDCVCYLLDRGASVDCLKKADCLSQNEVPAFEKVLISWESETRKR
AGGAAEWYTEPKLVLVGFRTPLMMACTRKNLEVIQDLVEHGANPLLKNKDGWNSFHIASREGDP
LILQYLLTVCPDAWKTESKIRRTPLHTAAMHGCLEAVKVLLTRCQYEPDCKDSCGITPFMDAIQ
CGHIDIARLLLETHEACPSAEDNLGAQALHRAAVTGQDEAIQFLVSDLGINVDVRAATTHLTAL
HYAAKW

hide sequence

Ensembl Acc Id:

ENSCLAP00000009822 ⟸ ENSCLAT00000009951

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000006802	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000009951	ENTREZGENE
	ENSCLAT00000009951.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
NCBI Gene	Ankrd16	ENTREZGENE
PANTHER	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	MOLTING PROTEIN MLT-4	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	Ank_4	UniProtKB/TrEMBL
PRINTS	ANKYRIN	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48403	UniProtKB/TrEMBL
UniProt	A0A8C2V9U4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar