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Gene: Znf397 (zinc finger protein 397) Chinchilla lanigera

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Symbol:

Znf397

Name:

zinc finger protein 397

RGD ID:

8873594

Description:

ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	21,974,795 - 21,978,770 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	21,973,687 - 21,982,202 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of DNA-templated transcription (ISO)

regulation of DNA-templated transcription (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (ISO)

microtubule cytoskeleton (ISO)

nucleolus (ISO)

nucleus (ISO)

plasma membrane (ISO)

Molecular Function

protein binding (ISO)

protein heterodimerization activity (ISO)

protein homodimerization activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Znf397
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	21,974,795 - 21,978,770 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	21,973,687 - 21,982,202 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZNF397
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	35,241,034 - 35,259,227 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	35,241,030 - 35,267,133 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	32,820,998 - 32,839,191 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	31,075,017 - 31,092,357 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	31,075,016 - 31,092,356	NCBI
Celera	18	29,628,890 - 29,646,298 (+)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI
HuRef	18	29,679,997 - 29,697,405 (+)	NCBI		HuRef
CHM1_1	18	32,747,978 - 32,765,382 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	35,431,795 - 35,450,511 (+)	NCBI		T2T-CHM13v2.0

Zfp397
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	24,085,798 - 24,098,030 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	24,087,749 - 24,097,730 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	23,952,741 - 23,964,671 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	23,954,692 - 23,964,673 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	24,113,189 - 24,123,172 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	24,097,696 - 24,105,876 (+)	NCBI		MGSCv36	mm8
Celera	18	24,444,761 - 24,454,744 (+)	NCBI		Celera
Cytogenetic Map	18	A2	NCBI
cM Map	18	12.44	NCBI

Zfp397
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	15,516,514 - 15,523,056 (+)	NCBI		GRCr8
mRatBN7.2	18	15,241,764 - 15,253,148 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	15,242,096 - 15,300,984 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	15,427,230 - 15,433,414 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	16,209,934 - 16,216,118 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	15,499,672 - 15,505,856 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	15,856,841 - 15,865,574 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	15,856,801 - 15,863,053 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	15,623,490 - 15,631,605 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	18	15,190,280 - 15,196,499 (+)	NCBI		Celera
Cytogenetic Map	18	p12	NCBI

ZNF397
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	52,627,135 - 52,638,401 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	38,321,419 - 38,331,615 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	28,459,065 - 28,467,907 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	32,048,326 - 32,054,047 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	32,048,338 - 32,054,047 (+)	Ensembl	panpan1.1		panPan2

ZNF397
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	54,749,351 - 54,758,743 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	54,752,185 - 54,756,800 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	54,181,054 - 54,190,506 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	54,720,489 - 54,729,949 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	54,720,559 - 54,729,473 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	54,403,124 - 54,412,576 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	54,426,443 - 54,435,889 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	54,720,158 - 54,729,614 (-)	NCBI		UU_Cfam_GSD_1.0

Znf397
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	50,477,587 - 50,485,203 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936517	9,807,338 - 9,810,704 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936517	9,772,923 - 9,812,722 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF397
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	119,076,714 - 119,086,759 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	119,076,683 - 119,144,643 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	111,393,021 - 111,444,234 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF397
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	45,456,463 - 45,526,907 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	45,520,617 - 45,526,501 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	20,021,080 - 20,029,278 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf397
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624779	9,668,423 - 9,674,709 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624779	9,669,198 - 9,721,794 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005372801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01000595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01005547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000020317 ⟹ ENSCLAP00000020122

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955402	21,974,795 - 21,978,770 (+)	Ensembl

RefSeq Acc Id:

XM_005372801 ⟹ XP_005372858

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955402	21,973,687 - 21,982,202 (+)	NCBI

Sequence:

show sequence

CGTGAGCGGAAGGCCGAGGGTGCGCACTTCCGGTCTTTGTGGCTGGCCCCTCGGGTCTGCGGCT
TGGGCCTCGGCTGCTTCTAGGCTTCGCGGAAAGAAGAGATTACTCAAAGAAACTCTAAAGCACA
GAACCCAGTTGTACTGAGTTTTTGCTAAGCTGTTTCAGTCCAGAATGGCTAAGAATTCCAGTGT
AATTTCAACTCTGATACCTCAGGATCATCAGGAAGAAGGATTAATACTAGTGAAAATAGAAGAT
AACTTTTCCTGGGGTCCAAAATTTAAACAGAATGGGGATACCCAATCCTGCCAAGAACTGTTTA
GACAGCAGTTCAGAAAGTTTTGCTATCACGAGACACCTGGGCCCCGGGAGGCGCTGTGCCGACT
CCAGGAGCTGTGCTATCAGTGGTTAATGCCAGAGTTGCACACAAAGGAGCAGATCCTAGAACTG
CTGGTGCTGGAACAGTTCCTGAGCATCCTGCCTGAAGAGCTGCAGATCTGGGTTCAGCAGCAGA
GTCCAAGAAGTGGTGAGGAAGCTGTGACCCTGTTGGAGGATTTGGAGAGAGAGTTTGATGATCC
AGGGCAGCAGGTCGCAGCTAATCCACAGGGACCAGCAGTGCCGTGGAAGGAGTTGACATTTCTT
GGAAGCTCCCATGAGTCAACAAACATCCACCTCCAGCCTTTAGAGACACAGCTGAAATCCTGGA
AACCTTGCCTTTCCCCTAGAAGTGATTATGAGAACAGTGAGACAGCAGCACAGGAGAACATTTC
AGGAGAAAAGCCAGAGGACCTCTCTCAGGAATCTTCATTTGGAGGAATTGCTGAGTGTGAAAGC
AACTCAGAGTGGCGGCAAAGAAGTGCTACAGGGGAGAAATTAAGACGATCCCCACCCCACGGAA
GCAGTTTTAGGCAAGTGATTGTCACACACAAATCTTTAGGAAAGAGAAACCATCTTGATGACCC
TCAAAGATACTTGATTTTAAGTACAAACTCTGTACCAAGTCAGAAAGTTGCTACAGAAGAGAGA
CCTTATAGATGTGATACATGCGGCCACAGCTTCAAGCAGCATTCTTCCCTAACACAACATCAGA
GGATCCACACCGGAGAAAAACCCTATACATGTAGTCAGTGTGGGAAGGCCTTTAGCTTAAGGTC
ATACCTTATTATTCATCAAAGAATCCACAGTGGTGAGAAAGCATATGAATGTAGTGAATGTGGA
AAAGCATTCAATCAGAGCTCAGCCCTCATTAGACATCGGAAAATTCACACGGGTGAAAAATCTT
GCAAATGTAATGAGTGTGGCAAAGCATTCAGTCAAAGTTCATATCTCATTATACATCAAAGAAT
TCACACTGGTGAGAAACCCTATGAATGTAATGAGTGTGGAAAAACCTTTAGCCAGAGCTCAAAG
CTTATTAGACATCAGCGAATTCATACAGGAGAGCGACCCTATGAATGTAATGAATGTGGGAAAG
CTTTCAGGCAGAGCTCAGAGCTGATTACCCATCAGAGGATACATAGTGGAGAGAAGCCCTATGA
ATGTAATGAATGTGGAAAGGCCTTCAGTCTAAGCTCAAACCTCATCAGACATCAAAGAATTCAC
AGTGGAGAAGAACCTTATCAGTGTAATGAATGTGGTAAAACCTTCAAAAGGAGGTCAGCCCTTG
TTCAGCACCAGAGAATCCACTCTGGGGATGAAGCTTATATATGTAGTGAGTGTGGGAAGGCTTT
CAGGCACAAATCAGTTCTTGTTCGCCATCAGAGGGTCCACACTGCAAAGTAAATTGTAAATACA
GTGACTATTATAAATATTTCAGTCAGATTTCTATTTTTGTTAGCCAGACAGTTTTCTTGGGAGC
ACGATTCCATCAGAGTTGTAACTACTAGGTCTTGAGTCATTCTGGCTTTGTGCAGCATTTCCCA
ATGCTGGTGTGACTTGTCCTATGAAAGCTTTTCCTGTGATTAATCAGAACAGATAATGGAAGAA
TTGTTACTTTCAGCTTTTCTTTACTGTTGGAAATACTCAGGAAAGAGGAAAAATGGAAATACAA
TGTTGACATCTCATTTTCTCAAAATGTCGTAAAAAGGGTGTAGGGATCTAGGCCTTGTTACTAC
AGCTGATTGTGAGTGTGCCAGGCTTGGGCCATAGTGTAGACATAGTGTAGTATGAAGGACTTTG
TCTCAGGAACTCAGAAAGTTTTACTAGACCAATTCAGAATAGAGACAGGGCAACAAAAAAGGTA
GAGAAACAGTTTGTTGGTGTTTTCTTGAGCCCGAAGCAGGCCAGAAATTAGGCATGAGAAGAAT
ACAAATTAATTTATCCAACAGTTACTTTTTTAGTACTTGCTTTGTATCAGAGACTAGACATATA
GTGGAAAGTAAGGTCTAATCCCTATGATCTAATGGGCAAGGCAGCCATTAGGCAGTGATACAAT
GGTGTGATCACTGCTTTGTGATTTTAAGGAGCTTCTGACTCAGCCTTAAATGAAGAAGTGGCAA
AAATGACATGAAGGATGAGTAGGGATTAGTGAGGGAGAAGGTAGTCCAGGGGAAAACGTTCCCA
TTAGAGGGAGCAACAGATAAAGACCACAGAGGAAGTGTGAAATATTCCCTGCTAAGTTCCTTTT
GAATTAAGAGTCACACCTGTAAGAAATATGGGTGTAGCCAAATTCTGAAGTAGTGCCTATAGCA
AAATATAAACCAATTGAAAAGTTTCTGTTAATGGACAAAACCTGGAGCCCTTGGACCAGAGCAC
TGTAAGGAGTTTTAGTCTTGCTCAGTATGATCCAAGAAGAAGAACTAATAGGTGGTTTGCTTTC
TTTCCCAACCTCTAGGATAGGCTAGAATTTCCTTGGGGAGGTAGTGGGTATAGATGTATGAAAG
AGCCTAACCTAGATGTTACGAGTCTCTAGAAGTTTAAATCTCCCTCTCCTAAAAGTAAGTCTCC
TTTGTTGCTTAAGACAGTAGTGGACCTGCTATCAGGTTAATCCCCAAGGCTCTTGAGTTGGGAG
CTGCCATATCATTTATTTCTGAAGGGACAGCCCCACAATTCCTAGTATATTCCCTTGGGCTCAG
GTGCTCAAAAAATATTTGTTAGTGGCTGGGCCTGTGAGTTATTCTCCAAGCACCTCACACATTG
TTTTGTCTTAATGTGTACTGTATTCCACAGTATCTTCAAATTTTGTTAAAAGACGGTGCTAAAG
GGAAATAAAAAGAAGTAACAATCATGTTCCATCAAGATTTCCCCTCCTCTGAGGAGCCTAATGC
TGGTGCCTGATGTGATAATGAGATAGAAAATTGTACGCATTAACCAGGCACCTATTCTCTTGCT
TACTGTGAGGTGGGAGGTTGTGCACATTAGTCAACAGCAAAAAGACATCATTCAATAGGCCTAC
TATGTTGGAGGAATAACACCAAAAATCTGTGTAGAAATCTAGAATCTTGTGCATAGAAAAATAA
TTTTCATAAAGATAAAAATAATTAACACTCCTCTTGAATATATATATATATGAGTATGTGCTAG
CCAGTAAGAATTGCAATAGAGCTAAATCTCCATATTTAAAGAGAAATGAAAAAAGAATGGTATC
ATTTGGAAATATGGTAAAATGTAATAAAATACGTAAGAGCTATACAACTCTTGTTTTCCTCCAG
AAAATACCCCAACTGAAAAAGGATATTAAATAGGAATTAATATACTACAAAAGGAAAACACTAT
AGAGAGCTCTTACCTATGTCAGTAAAAAATGTAAGAGGTACTTCCTAAGGGCTTTGTGTATATG
TATTAGTTATTTCTTATGGCAGCCCATATTTTGTAGATCAGGAAATGAAGGCTAAAGGTTATGG
CCAAAAAGTGGTAGGGTCAGGCTTTGAATTCAACTCTTTTATACAACCACTTTATACTGCCTGC
ATGCAGTCCCAATAGAAAAACGTCAAGTAAACAAATCACAAAAGAAGCAGTGCCAATGGACAAT
GGATGTTCAATCTTGATAAATTAAAAAGTGTATTGAATCAAGAGTCGGGATAGCACATACTATA
AAATTCACAGACAGCCAGGAAAATTGGGACTGGCATGTTGCTGGTGGGATGTGAAGAGACAGTA
TCTTTGGCAATCAGTACCAGAAGCCTTAAGCATTGCCTTTGACTTAAAATTCTACCTGGAAATA
TATTTCAGAACTCATCATGAATGTGCACTCTTAAAAACTCTTAAAACTGGTGTTGATTAATGTT
AAAAGACATGAAGCATTCATGATACATTATTAAATAAAATAGTACAAGATAATATGATCCATGT
AAAATACATATTTATGCATTAAAATACAAAAAATACACAATCTCAAGGTGTTATACTAGTTATC
TCTCAGAGGTATAGCTAACTTAATTTCTGTTGGGCTTTTATGTATTCTAAATTTTTCGGCAGTA
CTTAATACTCAGTATAACAGAGTGGCTGAAGGTATACGTCAGTGGTAAAAGTGCATACTTAATG
TGTTCAGTCCCCAGCACCAAAAAAGTAGGGTTTTTTTGGGTCAGGGGAAGGGGTTGAGAAAAAA
GTGAATGGAAGCCTAGGATAGTTGGAAAAGTATTTAAAACAAAAACTTGCTTTCTGTACCATCT
CTGTTCCTTCTAAGTCTCAGTTAGCACTTAACTCTAATCTTGGATTGCATTATCATTTCCCTTT
CCTTCCACTAGTGATTGAACTCATAACTTCATGTATGCTAGGTAGGCAAGCACTTTACCACTGA
GCTACATCCCTAGCCTCAGTTTCATCATTGATAAAACAATGGTAGACTTGCCCACCTCAAACAT
AGTATTTAAAAAGACCTCTATAGGTTATAAATTCCGGTGTAAATACAATATGAGTCCCTGAGGA
TTTTTGATTGGGAAAAGAAATACCCCTTGAAGTGTTCAAGACCTTTGGTCATTAGTTTTCACAT
GAATTCTGCAGCTGTAAGCAAGTCATCTTGCAAGTCTGGAACCTTATGTGAAAGGAGCCGGAGA
AGATGGGCTTTTATGGTCAAAAGTTCAACACTGTGTGTTTGTGAAATGGATTTGTTTTCTTCCA
CCAAACTTTTGTAGAAGACAAGCAGTCCACGTCTTTCTGCTCAGTCAGGGCTGTCTTGTTTCTC
TTCGTATAAAAGCATTCTAGTGGGTAAGTGTCTGCTTTAAATGGATCTTACAGGAATTTTTAAT
AAAAAGCAACTTAGGCACAATGCTTAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005372858	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000020122
	ENSCLAP00000020122.1

RefSeq Acc Id:

XP_005372858 ⟸ XM_005372801

- UniProtKB:

A0A8C2VX44 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAKNSSVISTLIPQDHQEEGLILVKIEDNFSWGPKFKQNGDTQSCQELFRQQFRKFCYHETPGP
REALCRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQQSPRSGEEAVTLLEDL
EREFDDPGQQVAANPQGPAVPWKELTFLGSSHESTNIHLQPLETQLKSWKPCLSPRSDYENSET
AAQENISGEKPEDLSQESSFGGIAECESNSEWRQRSATGEKLRRSPPHGSSFRQVIVTHKSLGK
RNHLDDPQRYLILSTNSVPSQKVATEERPYRCDTCGHSFKQHSSLTQHQRIHTGEKPYTCSQCG
KAFSLRSYLIIHQRIHSGEKAYECSECGKAFNQSSALIRHRKIHTGEKSCKCNECGKAFSQSSY
LIIHQRIHTGEKPYECNECGKTFSQSSKLIRHQRIHTGERPYECNECGKAFRQSSELITHQRIH
SGEKPYECNECGKAFSLSSNLIRHQRIHSGEEPYQCNECGKTFKRRSALVQHQRIHSGDEAYIC
SECGKAFRHKSVLVRHQRVHTAK

hide sequence

Ensembl Acc Id:

ENSCLAP00000020122 ⟸ ENSCLAT00000020317

Protein Domains

C2H2-type SCAN box

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000013786	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000020317	ENTREZGENE
	ENSCLAT00000020317.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.4020.10	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	SCAN_dom	UniProtKB/TrEMBL
	SCAN_sf	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	Znf397	ENTREZGENE
PANTHER	ZINC FINGER AND SCAN DOMAIN-CONTAINING	UniProtKB/TrEMBL
	ZINC FINGER AND SCAN DOMAIN-CONTAINING PROTEIN 30	UniProtKB/TrEMBL
Pfam	SCAN	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
PROSITE	SCAN_BOX	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	SCAN	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	Retrovirus capsid dimerization domain-like	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A8C2VX44	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar