Gene: Znf282 (zinc finger protein 282) Chinchilla lanigera |
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Analyze |
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Symbol: |
Znf282 |
Name: |
zinc finger protein 282 |
RGD ID: |
8715082 |
Description: |
ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
NCBI Annotation Information: |
Annotation category: partial on reference assembly |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955491 | 4,458,051 - 4,479,143 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955491 | 4,457,963 - 4,480,732 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
Comparative Map Data
Znf282 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955491 | 4,458,051 - 4,479,143 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955491 | 4,457,963 - 4,480,732 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ZNF282 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 7 | 149,195,546 - 149,226,243 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 7 | 149,195,546 - 149,226,243 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 7 | 148,892,638 - 148,923,334 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 148,523,510 - 148,554,272 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 7 | 148,330,201 - 148,360,975 | NCBI | | | | | Celera | 7 | 143,561,753 - 143,592,540 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q36.1 | NCBI | | | | | HuRef | 7 | 142,969,580 - 143,000,319 (+) | NCBI | | HuRef | | | CHM1_1 | 7 | 148,900,975 - 148,931,740 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 7 | 150,377,373 - 150,408,083 (+) | NCBI | | T2T-CHM13v2.0 | | | CRA_TCAGchr7v2 | 7 | 148,230,571 - 148,261,360 (+) | NCBI | | | | |
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Zfp282 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 47,853,433 - 47,885,419 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 47,854,138 - 47,885,419 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 47,877,209 - 47,908,485 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 47,877,204 - 47,908,485 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 47,827,554 - 47,858,484 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 47,807,142 - 47,836,553 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 48,407,118 - 48,438,141 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | B2.3 | NCBI | | | | | cM Map | 6 | 22.94 | NCBI | | | | |
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Zfp282 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 78,215,940 - 78,241,193 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 76,884,996 - 76,910,250 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 76,884,924 - 76,911,370 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 82,097,066 - 82,123,516 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 77,871,404 - 77,897,854 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 76,312,869 - 76,339,319 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 77,554,269 - 77,580,714 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 77,554,269 - 77,580,714 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 142,223,904 - 142,250,349 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 76,010,887 - 76,037,332 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 76,282,531 - 76,312,340 (+) | NCBI | | | | | Celera | 4 | 71,833,408 - 71,859,856 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q24 | NCBI | | | | |
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ZNF282 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 6 | 185,779,474 - 185,810,240 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 7 | 37,789,738 - 37,820,504 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 7 | 140,923,285 - 140,954,041 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 7 | 153,400,836 - 153,430,257 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 7 | 153,400,957 - 153,459,887 (+) | Ensembl | panpan1.1 | | panPan2 | |
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ZNF282 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 16 | 14,239,286 - 14,268,057 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 16 | 14,239,438 - 14,265,719 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 16 | 14,848,210 - 14,876,885 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 16 | 15,953,532 - 15,982,221 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 16 | 15,953,059 - 15,979,936 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 16 | 14,334,110 - 14,362,767 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 16 | 14,915,293 - 14,943,961 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 16 | 14,965,024 - 14,993,706 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Znf282 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405118 | 7,589,244 - 7,612,708 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936527 | 5,290,179 - 5,314,380 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936527 | 5,290,721 - 5,314,185 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ZNF282 (Sus scrofa - pig) |
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ZNF282 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 21 | 117,753,726 - 117,783,723 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 21 | 117,753,828 - 117,785,025 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666072 | 13,704,571 - 13,734,460 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Znf282 (Heterocephalus glaber - naked mole-rat) |
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Expression
RNA-SEQ Expression
Sequence
Ensembl Acc Id: |
ENSCLAT00000002113 ⟹ ENSCLAP00000002068 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 Ensembl | NW_004955491 | 4,458,051 - 4,479,143 (+) | Ensembl |
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RefSeq Acc Id: |
XM_013504590 ⟹ XP_013360044 |
Type: |
CODING |
Position: |
Chinchilla Assembly | Chr | Position (strand) | Source |
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ChiLan1.0 | NW_004955491 | 4,457,963 - 4,480,732 (+) | NCBI |
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Sequence: |
GAGCTGTCCCGCCCCGGCGAGGGGGAAGGCGCCTGGAAAACGTTCTTCCTCTGCCTGGCCGGCC CGAGCGGGGAACAGCGCTCCCAGGATGCAGTTTGTGTCAACACGGCCGCAGCCTCAGCAGCTGG GCATCCAGGGCCTGGGGCTGGACAGCGGGAGCTGGAGCTGGGCCCAGGCGCTGCCCCCCGACGA GGTCTGCCACCAGGAGCCGGCGCTGCGCGCGGAGATGGCCGAGGGGANNNNNNGCACACAGGCT CAAGAATGGGACATGGATGCCCGGCGACCGATGCCGTTTCAGTTCCCACCCTTCCCAGACCGGG CCCCTGTCTTCCCTGACCGAATGATGCGGGAGCCGCAGTTGCCCACGGCAGAGATCTCGCTGTG GACCGTGGTGGCCGCCATTCAGGCCGTGGAACGAAAGGTGGACGCCCAGGCCAGCCAGCTGCTC AACCTGGAGGGCCGCACGGGGACGGCCGAGAAGAAGCTGGCCGACTGCGAGAAGACGGCGGTGG AGTTCGGCAACCACATGGAGAGCAAGTGGGCCGTGCTGGGGACGCTGCTGCAGGAGTACGGGCT GCTGCAGCGGCGGCTGGAGAACCTGGAGAATCTGCTGCGCAACCGGAACTTCTGGGTGCTGCGG CTGCCCCCGGGCAGCAAGGGCGAGGCCCCCAAGGTTCCGGTGACTTTTGTGGACATCGCTGTCT ACTTCTCTGAGGATGAGTGGAAGAACCTTGACGAATGGCAGAAGGAGCTTTACAACAACCTTGT GAAGGAGAACTACAAAACCCTGATGTCCCTGGATACAGAGGGCCCTGTGGCCAAGCCAGATGCG CCGGCCCCGGTGGAGCCCAGGGAGGAGCCGTGTGTGTGGGAGCAGCGTCACCCCGAAGAGAGAG AGGTCGCAGTGAACACAGACACAGGAGCAGAGCCCCTGGCACCTGCCCAGGACGTGAGCTCCCA GGTGAAGCGAGAGGAGGCCCTATGCACGCGGGGCCAGCGGGGCCTGGAGGACAGAGCCATTCCC ACGGAATCCATCACCGACTCCCCGATCTCTGCCCAAGACCTCTTGTCCCGGATTAAGCAGGAGG AGTCGCAGTGTGTGTGGGACCAGCAGGATTTGGCGGAGAGAGATATTCCCACGGACCCCAATTC AGAGTCTCTCATCTCAGCACATGACATTTTCTCCTGGATCAAGCAGGAGGAGCAGCCGTACCCA TGGGGCCCACGCGACGCAATGGAGGGAGAGCTTGGCCTGGACTCTGGCCCCAGTGACAGCCTGC TGCTGGTGAAGAACCCGCCCGCAGCCCCGCCGCAGCCCCAGCCGCACCCGCAGAGCCTGCCCGC GCTGGCGGTGCCCGAGACCCCCGGCGGCCCCTCCGGCCGCGCGCTGCTGGACGACAGCTTCGCG GTGCTGCCCGGGGAGCGCGGCGCGGGCGAGGCGCAGGCGGGCGCGGAGGGGGGCGCGGGCGGCG GCCCCAGCGGGGGCCCCGGGGCCGGGGGCGGCTGCGGCAGCTGCTGCCCGGGCGGCCTGCGGCG GAGCCTCCTGGCGCACGGCGGCGCGCGCAGCAAGCCCTACTCGTGCCCCGAGTGCGGCAAGAGC TTCGGGGTGCGCAAGAGCCTCATCATCCACCACCGCAGCCACACCAAGGAGCGGCCCTACGAGT GCGCCGAGTGCGAGAAGAGCTTCAACTGCCACTCGGGGCTCATCCGCCACCAGATGACGCACCG CGGCGAGCGGCCCTACAAGTGCTCGGAGTGCGAGAAGACCTACAGCCGCAAGGAGCACCTGCAG AACCACCAGCGGCTGCACACGGGCGAGCGGCCCTTCCAGTGCGCGCTGTGCGGCAAGAGCTTCA TCCGCAAGCAGAACCTGCTCAAGCACCAGCGCATCCACACGGGCGAGCGGCCCTACACGTGCGG CGAGTGCGGCAAGAGCTTCCGCTACAAGGAGTCGCTCAAGGACCACCTGCGCGTGCACGGCGCG GGCCCCGGCCTCGGCGCGCCCCCGCGGCCGCTGCAGGCGCCGCCCGAGCGGGACTAGGGCTGGG CGGGGGCGGCGAGGGCTCCAGGCGCCTTCCCGCCCTCTCGCCCGCCGCCACCTGCTGGGATCGC ACTCCAGACGGTCCCCCAGGCCGGCCAGGGCTATCCCAGACCTGTCCAGCCCGAATGCACAGCC TAGCGCATCTCCTAGAGCGGCCGGGGAGTGCCCGAGGAAGGCCGGGGGCGTGGGCGCGGCCCCA CAGACCACCTAGCCATCGTGTGGGGGACCCCACTGACCGCCGGGCCGGGGCTGCAGATGTGTTG GGGGAAGCAACTGGGAAATTTGACACCGGCCTGAAATAAGCAAGTCCGACCCTGAGGGCGAGTA GGGGGCGCCCTGGAGAGGGAAGTGAAGGTGCAATCACGGGGGTGCGCTAAGGGTGCTGTCCTCG CCAGGATGACACTGCCTCGCGCCTCAACGGCGCTTTATACTTTTTAACGAGTTTTCTATCCGTT ATCTCTTTTCACCCTTAGCCTCTCCCTCTGAGGGAGGTGTGATAGGGTTTTCCTCACGCGGTAA CTGAGGAGAGGGAGACGCAGGGAAGATGGGGTCCCCACCATCACCCCGCAAGGGCATGGTGAAG TCCCCGCGGCACACACTGCCTACCTCCGTCCTCCGGGGACGCTCCTGCCTCCTGGTCTCTCTCC TCTCCCTTCCCTCCCGTTGGCCACCCCTCTCCTCTCAGATCGGCAGCGTCAGGGGCCAATTCCT GGGGTTACTGGGAACAGGGAACAGACTGGCTACAGAAATGCCCGGGCGGGCGCCTGGGTGGTAG CGCCCTGTTCTCAGGCCTGCCCCCCGCCTCCAGCCCCTGGCCCCTCAACCTGGTGCAGGGGCGG CTTTTCACTGCACAGGAGGGCTCTGCCCTCCGGAGGCAGCGGTGCTCTGGGTCCAAACAGCCAT CGAGGAATAAATCTGCCCAGGAGAGCCGGGCAGGTGGGTGCTAGAGTTTGAGCCCCAGGCTCTC TCCTGCCCTCACTCTCCCAATTGGTGCTATATGTTCACTGACCATATCTGTGGACAAGGACACA GACCCTACTATCTTCTGCCCCTGCAGGCGCCTTGGGAAGCGCCCAAAGGACTCCCTTCCTCACT GGTGCATTGCCCCACGGCTCGGGGCGTTGTGGCCCTAAGGGCCACACAGTTTCCATTTCAGCGT CTTGCATGGCCAGGCACTGGGGTGGGGTGCACGCCCCAGGACCCTTGTTTGTGTCGGAAATGGC TTTTCCCGCTCCTCCCATGGATTCTGCTTCTCTCCCAGGAGCGCAGTGAATGGCCGCCACCGGG CGGCGCTGTGTCTGGTGGCGCCACGCCTCCGAGTGCCCTGCTTCTGCCCTCCTGCTCATCTGCA CTGCTCCGGTTTCCTCAGCTTTTCTCCTCTTTCTTTTCTTCCTTCCTTCCTTCCTTCCTTCCTT CCTTCCTTCCTTCCTTCCTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTGCCGTGCAAAGGG AATTTCTGAAATTAAATAAAAGGTAATCCAGATTGCAGACTGCATGTTCGCCGAGCTGGAGGGT TTTCCAGCGTGGCACCTACAGTAAAGCCTCAATGAACTGGAATCCA
hide sequence
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RefSeq Acc Id: |
XP_013360044 ⟸ XM_013504590 |
- Sequence: |
MQFVSTRPQPQQLGIQGLGLDSGSWSWAQALPPDEVCHQEPALRAEMAEGXXXTQAQEWDMDAR RPMPFQFPPFPDRAPVFPDRMMREPQLPTAEISLWTVVAAIQAVERKVDAQASQLLNLEGRTGT AEKKLADCEKTAVEFGNHMESKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWVLRLPPGSKGE APKVPVTFVDIAVYFSEDEWKNLDEWQKELYNNLVKENYKTLMSLDTEGPVAKPDAPAPVEPRE EPCVWEQRHPEEREVAVNTDTGAEPLAPAQDVSSQVKREEALCTRGQRGLEDRAIPTESITDSP ISAQDLLSRIKQEESQCVWDQQDLAERDIPTDPNSESLISAHDIFSWIKQEEQPYPWGPRDAME GELGLDSGPSDSLLLVKNPPAAPPQPQPHPQSLPALAVPETPGGPSGRALLDDSFAVLPGERGA GEAQAGAEGGAGGGPSGGPGAGGGCGSCCPGGLRRSLLAHGGARSKPYSCPECGKSFGVRKSLI IHHRSHTKERPYECAECEKSFNCHSGLIRHQMTHRGERPYKCSECEKTYSRKEHLQNHQRLHTG ERPFQCALCGKSFIRKQNLLKHQRIHTGERPYTCGECGKSFRYKESLKDHLRVHGAGPGLGAPP RPLQAPPERD
hide sequence
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Ensembl Acc Id: |
ENSCLAP00000002068 ⟸ ENSCLAT00000002113 |
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2015-08-25 |
Znf282 |
zinc finger protein 282 |
LOC102027864 |
uncharacterized LOC102027864 |
Symbol and/or name change |
5135510 |
APPROVED |
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