LOC102552965 (uncharacterized LOC102552965) - Rat Genome Database

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Gene: LOC102552965 (uncharacterized LOC102552965) Rattus norvegicus
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Symbol: LOC102552965
Name: uncharacterized LOC102552965
RGD ID: 7709993
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86107,850,840 - 107,861,488 (-)NCBIGRCr8
mRatBN7.26102,119,638 - 102,129,558 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.06106,173,443 - 106,176,398 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06114,305,290 - 114,318,238 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera699,964,576 - 99,967,531 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC102552965
38 total Variants

1 to 10 of 35 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)693701310128713626Rat
1331722Thshl1Thyroid stimulating hormone level QTL 111.70.0001blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)689762877106752806Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat

1 to 10 of 35 rows






RefSeq Acc Id: XR_005486327
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86107,850,840 - 107,861,409 (-)NCBI
mRatBN7.26102,119,638 - 102,129,558 (-)NCBI
RefSeq Acc Id: XR_010052741
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86107,858,653 - 107,861,488 (-)NCBI
RefSeq Acc Id: XR_010052742
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86107,850,840 - 107,861,488 (-)NCBI
RefSeq Acc Id: XR_593116
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86107,858,653 - 107,861,382 (-)NCBI
mRatBN7.26102,126,991 - 102,129,558 (-)NCBI
Rnor_6.06106,173,443 - 106,176,398 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-36869 BioCyc
NCBI Gene LOC102552965 ENTREZGENE
PhenoGen LOC102552965 PhenoGen
RNAcentral URS0000CCFFA5 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102552965  uncharacterized LOC102552965      Symbol and Name status set to provisional 70820 PROVISIONAL