C1qbp (complement component 1, q subcomponent binding protein) - Rat Genome Database

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Gene: C1qbp (complement component 1, q subcomponent binding protein) Mus musculus
Analyze
Symbol: C1qbp
Name: complement component 1, q subcomponent binding protein
RGD ID: 735533
MGI Page MGI
Description: Enables mRNA binding activity and mitochondrial ribosome binding activity. Involved in cytosolic ribosome assembly and positive regulation of mitochondrial translation. Located in mitochondrion. Is expressed in several structures, including brain ventricular layer; genitourinary system; gut; orbito-sphenoid; and tooth. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 33. Orthologous to human C1QBP (complement C1q binding protein).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA407365; AA986492; complement component 1 Q subcomponent-binding protein, mitochondrial; D11Wsu182; D11Wsu182e; GC1q-R protein; gC1qBP; glycoprotein gC1qBP; HAB; HABP1; P3; P32
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm19088  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,868,672 - 70,873,852 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,868,662 - 70,873,852 (-)EnsemblGRCm39 Ensembl
GRCm381170,977,846 - 70,983,026 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,977,836 - 70,983,026 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,791,348 - 70,796,528 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361170,794,047 - 70,799,164 (-)NCBIMGSCv36mm8
Celera1178,532,249 - 78,537,440 (-)NCBICelera
Cytogenetic Map11B4NCBI
cM Map1143.21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
(R)-adrenaline  (ISO)
(Z)-3-butylidenephthalide  (ISO)
1,2-dimethylhydrazine  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
3-methylcholanthrene  (EXP)
4,4'-sulfonyldiphenol  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
7H-xanthine  (ISO)
9H-xanthine  (ISO)
acrolein  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
amiodarone  (ISO)
amitrole  (ISO)
arsenite(3-)  (EXP)
atrazine  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
caffeine  (ISO)
cannabidiol  (ISO)
carbon nanotube  (EXP,ISO)
chloropicrin  (ISO)
chromium(6+)  (EXP)
cisplatin  (EXP)
clofibrate  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
corosolic acid  (ISO)
CU-O LINKAGE  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
dioxygen  (EXP)
diuron  (ISO)
dopamine  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP,ISO)
etoposide  (ISO)
fenthion  (EXP)
floxuridine  (ISO)
flutamide  (ISO)
folic acid  (EXP)
FR900359  (ISO)
furan  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
hydrogen peroxide  (ISO)
hydrogen sulfide  (EXP)
inulin  (EXP)
ivermectin  (ISO)
L-ethionine  (ISO)
lovastatin  (EXP)
menadione  (ISO)
methidathion  (EXP)
methimazole  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylseleninic acid  (ISO)
microcystin RR  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
nefazodone  (ISO)
nickel atom  (ISO)
nimesulide  (ISO)
Nutlin-3  (ISO)
omeprazole  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phytoestrogen  (ISO)
pirinixic acid  (EXP,ISO)
progesterone  (ISO)
propiconazole  (EXP)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sulfadimethoxine  (ISO)
temozolomide  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
trichloroacetic acid  (ISO)
trichloroethene  (ISO)
trimellitic anhydride  (EXP)
tungsten  (EXP)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
warfarin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Ko MS, etal., Hum Mol Genet 1998 Nov;7(12):1967-78.
3. Characterisation of the rat and mouse homologues of gC1qBP, a 33 kDa glycoprotein that binds to the globular 'heads' of C1q. Lynch NJ, etal., FEBS Lett 1997 Nov 24;418(1-2):111-4.
4. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40.
7. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7937138   PMID:9524273   PMID:10047536   PMID:10100631   PMID:10349636   PMID:10684248   PMID:10725249   PMID:10887182   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11318612  
PMID:11698413   PMID:12443542   PMID:12477932   PMID:12904583   PMID:14610273   PMID:15102471   PMID:15663194   PMID:16141072   PMID:16141073   PMID:17486078   PMID:18070599   PMID:18166172  
PMID:18287559   PMID:18460468   PMID:18538737   PMID:18614015   PMID:18799693   PMID:19334288   PMID:19812375   PMID:20368287   PMID:20950273   PMID:21267068   PMID:21482787   PMID:21677750  
PMID:21873635   PMID:22008525   PMID:22904065   PMID:22982415   PMID:23180766   PMID:24942226   PMID:26465331   PMID:26496610   PMID:26792178   PMID:26816005   PMID:27183919   PMID:28378742  
PMID:28498888   PMID:28549777   PMID:28720899   PMID:29035880   PMID:29123152   PMID:29222160   PMID:29465311   PMID:29518331   PMID:30428349   PMID:30550785   PMID:31138677   PMID:31155612  
PMID:31162944   PMID:32098917   PMID:32325033   PMID:32606429   PMID:33103089   PMID:33528041   PMID:33578183   PMID:34421919   PMID:34860557   PMID:34978120   PMID:35516420   PMID:36828964  
PMID:37793777   PMID:38355793   PMID:38773982   PMID:38977785   PMID:39209214  


Genomics

Comparative Map Data
C1qbp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,868,672 - 70,873,852 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,868,662 - 70,873,852 (-)EnsemblGRCm39 Ensembl
GRCm381170,977,846 - 70,983,026 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,977,836 - 70,983,026 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,791,348 - 70,796,528 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361170,794,047 - 70,799,164 (-)NCBIMGSCv36mm8
Celera1178,532,249 - 78,537,440 (-)NCBICelera
Cytogenetic Map11B4NCBI
cM Map1143.21NCBI
C1QBP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38175,432,777 - 5,439,155 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl175,432,777 - 5,448,830 (-)EnsemblGRCh38hg38GRCh38
GRCh37175,336,097 - 5,342,475 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36175,276,823 - 5,283,195 (-)NCBINCBI36Build 36hg18NCBI36
Build 34175,276,822 - 5,283,195NCBI
Celera175,352,471 - 5,358,843 (-)NCBICelera
Cytogenetic Map17p13.2NCBI
HuRef175,226,626 - 5,232,998 (-)NCBIHuRef
CHM1_1175,345,744 - 5,352,160 (-)NCBICHM1_1
T2T-CHM13v2.0175,326,513 - 5,332,892 (-)NCBIT2T-CHM13v2.0
C1qbp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81056,198,534 - 56,203,185 (-)NCBIGRCr8
mRatBN7.21055,699,954 - 55,704,605 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1055,699,954 - 55,704,649 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1060,379,671 - 60,384,322 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01059,868,190 - 59,872,841 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01055,367,280 - 55,371,931 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01057,613,876 - 57,618,527 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1057,613,879 - 57,618,527 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01057,359,088 - 57,363,739 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41057,881,783 - 57,886,434 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11057,895,408 - 57,900,057 (-)NCBI
Celera1054,845,644 - 54,850,295 (-)NCBICelera
Cytogenetic Map10q24NCBI
C1qbp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546710,788,277 - 10,792,449 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546710,788,142 - 10,792,272 (-)NCBIChiLan1.0ChiLan1.0
C1QBP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21913,043,308 - 13,054,205 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11715,011,539 - 15,017,922 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0175,481,114 - 5,487,482 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1175,473,239 - 5,479,735 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl175,473,239 - 5,479,735 (-)Ensemblpanpan1.1panPan2
C1QBP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1531,354,665 - 31,359,672 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl531,354,723 - 31,359,469 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha531,492,700 - 31,497,711 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0531,459,329 - 31,464,338 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1531,424,879 - 31,429,890 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0531,383,770 - 31,388,780 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0531,560,209 - 31,565,218 (+)NCBIUU_Cfam_GSD_1.0
C1qbp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560253,524,367 - 53,529,566 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366772,371,418 - 2,376,608 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366772,371,400 - 2,376,608 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C1QBP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1251,548,415 - 51,555,689 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11251,548,361 - 51,553,076 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
C1QBP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1164,843,202 - 4,850,639 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl164,843,438 - 4,850,600 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605916,737,956 - 16,745,399 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
C1qbp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247869,239,177 - 9,243,961 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247869,239,119 - 9,243,617 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in C1qbp
3 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:377
Count of miRNA genes:288
Interacting mature miRNAs:324
Transcripts:ENSMUST00000078528, ENSMUST00000155371, ENSMUST00000179291
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170691198104691366Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170691198104691366Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116899082672490826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170691198104691366Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116899082672490826Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116707819179813912Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116899082672490826Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116899082672490826Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116899082672490826Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116899082672490826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116899082672490826Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116899082672490826Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116899082672490826Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116899082672490826Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse

Markers in Region
RH126506  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,977,861 - 70,978,110UniSTSGRCm38
MGSCv371170,791,363 - 70,791,612UniSTSGRCm37
Celera1178,532,264 - 78,532,513UniSTS
Cytogenetic Map11B4UniSTS
cM Map1137.0UniSTS
Whitehead/MRC_RH11904.75UniSTS
UniSTS:236627  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,984,585 - 70,984,833UniSTSGRCm38
MGSCv371170,798,087 - 70,798,335UniSTSGRCm37
Celera1178,538,999 - 78,539,247UniSTS
Cytogenetic Map11B4UniSTS
cM Map1137.0UniSTS
AA407679  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,977,937 - 70,978,080UniSTSGRCm38
MGSCv371170,791,439 - 70,791,582UniSTSGRCm37
Celera1178,532,340 - 78,532,483UniSTS
Cytogenetic Map11B4UniSTS
cM Map1137.0UniSTS
Whitehead/MRC_RH11904.85UniSTS
Whitehead/MRC_RH11904.75UniSTS
D11Wsu182e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,977,879 - 70,978,113UniSTSGRCm38
MGSCv371170,791,381 - 70,791,615UniSTSGRCm37
Celera1178,532,282 - 78,532,516UniSTS
Cytogenetic Map11B4UniSTS
cM Map1137.0UniSTS
cM Map1140.0UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000078528   ⟹   ENSMUSP00000077612
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,868,662 - 70,873,852 (-)Ensembl
GRCm38.p6 Ensembl1170,977,836 - 70,983,026 (-)Ensembl
Ensembl Acc Id: ENSMUST00000155371
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,868,674 - 70,869,697 (-)Ensembl
GRCm38.p6 Ensembl1170,977,848 - 70,978,871 (-)Ensembl
Ensembl Acc Id: ENSMUST00000179291
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,871,836 - 70,873,833 (-)Ensembl
GRCm38.p6 Ensembl1170,981,010 - 70,983,007 (-)Ensembl
RefSeq Acc Id: NM_007573   ⟹   NP_031599
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,868,672 - 70,873,852 (-)NCBI
GRCm381170,977,846 - 70,983,026 (-)ENTREZGENE
MGSCv371170,791,348 - 70,796,528 (-)RGD
Celera1178,532,249 - 78,537,440 (-)RGD
cM Map11 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_031599 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH38075 (Get FASTA)   NCBI Sequence Viewer  
  AAL77246 (Get FASTA)   NCBI Sequence Viewer  
  CAA04530 (Get FASTA)   NCBI Sequence Viewer  
  EDL12634 (Get FASTA)   NCBI Sequence Viewer  
  EDL12635 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000077612
  ENSMUSP00000077612.7
GenBank Protein O35658 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_031599   ⟸   NM_007573
- UniProtKB: O35658 (UniProtKB/Swiss-Prot),   Q8R5L1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000077612   ⟸   ENSMUST00000078528

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35658-F1-model_v2 AlphaFold O35658 1-278 view protein structure

Promoters
RGD ID:6820504
Promoter ID:MM_KWN:8265
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   MEF_B6
Transcripts:OTTMUST00000013731
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,791,921 - 70,793,122 (-)MPROMDB
RGD ID:6820503
Promoter ID:MM_KWN:8266
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:OTTMUST00000013730
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,796,286 - 70,796,786 (-)MPROMDB
RGD ID:8675386
Promoter ID:EPDNEW_M15723
Type:initiation region
Name:C1qbp_1
Description:Mus musculus complement component 1, q subcomponent binding protein, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381170,982,977 - 70,983,037EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1194505 AgrOrtholog
Ensembl Genes ENSMUSG00000018446 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000078528 ENTREZGENE
  ENSMUST00000078528.7 UniProtKB/TrEMBL
Gene3D-CATH 3.10.280.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro MAM33 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MAM33_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12261 UniProtKB/TrEMBL
MGD MGI:1194505 ENTREZGENE
NCBI Gene 12261 ENTREZGENE
PANTHER COMPLEMENT COMPONENT 1 Q SUBCOMPONENT-BINDING PROTEIN, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10826 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MAM33 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen C1qbp PhenoGen
Superfamily-SCOP SSF54529 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt C1QBP_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8R5L1 ENTREZGENE, UniProtKB/TrEMBL