Klc3 (kinesin light chain 3) - Rat Genome Database

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Gene: Klc3 (kinesin light chain 3) Mus musculus
Analyze
Symbol: Klc3
Name: kinesin light chain 3
RGD ID: 733879
MGI Page MGI
Description: Enables kinesin binding activity and microtubule binding activity. Involved in sperm mitochondrial sheath assembly. Acts upstream of or within axo-dendritic transport. Located in several cellular components, including ciliary rootlet; mitochondrion; and motile cilium. Is expressed in cerebellum interpositus nucleus; deep cerebellar nucleus; dentate nucleus; fastigial nucleus; and vestibular nucleus. Orthologous to human KLC3 (kinesin light chain 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BC017147; Klct; MGC28837
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39719,128,365 - 19,138,101 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl719,128,362 - 19,138,029 (-)EnsemblGRCm39 Ensembl
GRCm38719,394,440 - 19,404,174 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl719,394,437 - 19,404,104 (-)EnsemblGRCm38mm10GRCm38
MGSCv37719,979,789 - 19,985,205 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36718,552,962 - 18,558,378 (-)NCBIMGSCv36mm8
Celera716,801,204 - 16,806,236 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map79.62NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Kinesin light-chain KLC3 expression in testis is restricted to spermatids. Junco A, etal., Biol Reprod 2001 May;64(5):1320-30.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:8786141   PMID:9426063   PMID:9624122   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12427867   PMID:12466851   PMID:12594206   PMID:15489334   PMID:15782199  
PMID:16018997   PMID:16141072   PMID:16141073   PMID:16301330   PMID:16602821   PMID:19164528   PMID:19861499   PMID:21267068   PMID:21592321   PMID:21677750   PMID:21873635   PMID:22561200  
PMID:26496610   PMID:35961787   PMID:37776549   PMID:38355793  


Genomics

Comparative Map Data
Klc3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39719,128,365 - 19,138,101 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl719,128,362 - 19,138,029 (-)EnsemblGRCm39 Ensembl
GRCm38719,394,440 - 19,404,174 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl719,394,437 - 19,404,104 (-)EnsemblGRCm38mm10GRCm38
MGSCv37719,979,789 - 19,985,205 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36718,552,962 - 18,558,378 (-)NCBIMGSCv36mm8
Celera716,801,204 - 16,806,236 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map79.62NCBI
KLC3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381945,340,750 - 45,351,519 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1945,333,434 - 45,351,520 (+)EnsemblGRCh38hg38GRCh38
GRCh371945,844,008 - 45,854,777 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361950,535,838 - 50,546,618 (+)NCBINCBI36Build 36hg18NCBI36
Celera1942,649,957 - 42,660,732 (+)NCBICelera
Cytogenetic Map19q13.32NCBI
HuRef1942,276,832 - 42,287,623 (+)NCBIHuRef
CHM1_11945,847,298 - 45,858,079 (+)NCBICHM1_1
T2T-CHM13v2.01948,167,961 - 48,178,760 (+)NCBIT2T-CHM13v2.0
Klc3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8188,173,842 - 88,183,806 (-)NCBIGRCr8
mRatBN7.2179,045,842 - 79,055,809 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl179,045,844 - 79,055,416 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx184,434,729 - 84,444,202 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0192,992,610 - 93,002,084 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0186,189,829 - 86,199,302 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0180,306,074 - 80,315,886 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl180,306,102 - 80,315,533 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0181,572,383 - 81,582,205 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4178,912,047 - 78,915,767 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1178,990,281 - 78,993,871 (-)NCBI
Celera173,507,861 - 73,517,337 (-)NCBICelera
Cytogenetic Map1q21NCBI
Klc3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555552,349,999 - 2,355,529 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555552,346,241 - 2,355,529 (+)NCBIChiLan1.0ChiLan1.0
KLC3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22051,501,703 - 51,513,394 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11953,373,373 - 53,384,264 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01942,293,515 - 42,300,592 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11950,887,900 - 50,898,708 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1950,887,900 - 50,898,689 (+)Ensemblpanpan1.1panPan2
KLC3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11110,190,252 - 110,194,950 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1110,189,613 - 110,194,940 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1109,674,774 - 109,693,950 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01110,723,132 - 110,742,320 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1110,723,179 - 110,730,839 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11110,398,740 - 110,417,935 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01110,032,880 - 110,052,043 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01110,902,451 - 110,921,633 (-)NCBIUU_Cfam_GSD_1.0
Klc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934917,464,178 - 17,469,142 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367061,812,068 - 1,819,639 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367061,811,727 - 1,816,485 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLC3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl651,727,904 - 51,735,754 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1651,727,891 - 51,735,753 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
KLC3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1638,794,013 - 38,804,294 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl638,798,727 - 38,804,829 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607318,396,724 - 18,407,021 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Klc3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249072,245,731 - 2,250,378 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249072,242,149 - 2,250,533 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1622
Count of miRNA genes:527
Interacting mature miRNAs:615
Transcripts:ENSMUST00000047170, ENSMUST00000108457, ENSMUST00000108458, ENSMUST00000108459, ENSMUST00000125246, ENSMUST00000154419
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
1301041Prnr2_mprion resistance 2 (mouse)Not determined71872879439674033Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse

Markers in Region
RH136578  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38719,395,495 - 19,395,671UniSTSGRCm38
MGSCv37719,980,844 - 19,981,020UniSTSGRCm37
Celera716,802,259 - 16,802,435UniSTS
Cytogenetic Map7A3UniSTS
cM Map74.0UniSTS
cM Map74.0UniSTS
AW240756  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38719,395,488 - 19,395,624UniSTSGRCm38
MGSCv37719,980,837 - 19,980,973UniSTSGRCm37
Celera716,802,252 - 16,802,388UniSTS
Cytogenetic Map7A3UniSTS
cM Map74.0UniSTS
cM Map74.0UniSTS
Whitehead/MRC_RH7251.83UniSTS
RH124636  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38719,395,426 - 19,395,647UniSTSGRCm38
MGSCv37719,980,775 - 19,980,996UniSTSGRCm37
Celera716,802,190 - 16,802,411UniSTS
Cytogenetic Map7A3UniSTS
cM Map74.0UniSTS
cM Map74.0UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001286038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_146182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017322153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC118017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI645529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY016862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY127751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000047170   ⟹   ENSMUSP00000038091
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl719,128,365 - 19,133,803 (-)Ensembl
GRCm38.p6 Ensembl719,394,440 - 19,399,878 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108457   ⟹   ENSMUSP00000104097
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl719,128,489 - 19,137,708 (-)Ensembl
GRCm38.p6 Ensembl719,394,564 - 19,403,783 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108458   ⟹   ENSMUSP00000104098
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl719,128,362 - 19,138,029 (-)Ensembl
GRCm38.p6 Ensembl719,394,437 - 19,404,104 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108459   ⟹   ENSMUSP00000104099
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl719,128,365 - 19,133,846 (-)Ensembl
GRCm38.p6 Ensembl719,394,440 - 19,399,921 (-)Ensembl
Ensembl Acc Id: ENSMUST00000125246
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl719,129,279 - 19,130,507 (-)Ensembl
GRCm38.p6 Ensembl719,395,354 - 19,396,582 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154419
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl719,128,426 - 19,129,907 (-)Ensembl
GRCm38.p6 Ensembl719,394,501 - 19,395,982 (-)Ensembl
RefSeq Acc Id: NM_001286038   ⟹   NP_001272967
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39719,128,365 - 19,133,823 (-)NCBI
GRCm38719,394,440 - 19,399,921 (-)NCBI
Celera716,801,204 - 16,810,498 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001286039   ⟹   NP_001272968
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39719,128,365 - 19,138,037 (-)NCBI
GRCm38719,394,440 - 19,404,104 (-)NCBI
Celera716,801,204 - 16,810,498 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001403685   ⟹   NP_001390614
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39719,128,365 - 19,137,724 (-)NCBI
RefSeq Acc Id: NM_146182   ⟹   NP_666294
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39719,128,365 - 19,133,823 (-)NCBI
GRCm38719,394,440 - 19,399,921 (-)NCBI
MGSCv37719,979,789 - 19,985,205 (-)RGD
Celera716,801,204 - 16,810,498 (-)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017322153   ⟹   XP_017177642
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39719,128,365 - 19,137,776 (-)NCBI
GRCm38719,394,440 - 19,403,851 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242432   ⟹   XP_030098292
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39719,128,365 - 19,137,776 (-)NCBI
GRCm38719,394,440 - 19,403,851 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242434   ⟹   XP_030098294
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39719,128,365 - 19,138,101 (-)NCBI
GRCm38719,394,440 - 19,404,174 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242435   ⟹   XP_030098295
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39719,128,365 - 19,133,843 (-)NCBI
GRCm38719,394,440 - 19,399,920 (-)NCBI
Sequence:
RefSeq Acc Id: NP_666294   ⟸   NM_146182
- Peptide Label: isoform a
- UniProtKB: Q91W40 (UniProtKB/Swiss-Prot),   Q3TZ56 (UniProtKB/Swiss-Prot),   D3Z710 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272968   ⟸   NM_001286039
- Peptide Label: isoform a
- UniProtKB: Q91W40 (UniProtKB/Swiss-Prot),   Q3TZ56 (UniProtKB/Swiss-Prot),   D3Z710 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272967   ⟸   NM_001286038
- Peptide Label: isoform a
- UniProtKB: Q91W40 (UniProtKB/Swiss-Prot),   Q3TZ56 (UniProtKB/Swiss-Prot),   D3Z710 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177642   ⟸   XM_017322153
- Peptide Label: isoform X2
- UniProtKB: D3Z710 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030098294   ⟸   XM_030242434
- Peptide Label: isoform X4
- UniProtKB: D3Z710 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030098292   ⟸   XM_030242432
- Peptide Label: isoform X1
- UniProtKB: D3Z710 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030098295   ⟸   XM_030242435
- Peptide Label: isoform X4
- UniProtKB: D3Z710 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000038091   ⟸   ENSMUST00000047170
Ensembl Acc Id: ENSMUSP00000104098   ⟸   ENSMUST00000108458
Ensembl Acc Id: ENSMUSP00000104097   ⟸   ENSMUST00000108457
Ensembl Acc Id: ENSMUSP00000104099   ⟸   ENSMUST00000108459
RefSeq Acc Id: NP_001390614   ⟸   NM_001403685
- Peptide Label: isoform b

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q91W40-F1-model_v2 AlphaFold Q91W40 1-508 view protein structure

Promoters
RGD ID:6892110
Promoter ID:EPDNEW_M9492
Type:initiation region
Name:Klc3_1
Description:Mus musculus kinesin light chain 3 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9493  EPDNEW_M9494  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38719,399,898 - 19,399,958EPDNEW
RGD ID:6892084
Promoter ID:EPDNEW_M9493
Type:single initiation site
Name:Klc3_3
Description:Mus musculus kinesin light chain 3 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9494  EPDNEW_M9492  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38719,403,882 - 19,403,942EPDNEW
RGD ID:6892086
Promoter ID:EPDNEW_M9494
Type:multiple initiation site
Name:Klc3_2
Description:Mus musculus kinesin light chain 3 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9493  EPDNEW_M9492  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38719,404,104 - 19,404,164EPDNEW
RGD ID:6841393
Promoter ID:MM_KWN:49063
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000056112,   OTTMUST00000056113
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36719,981,266 - 19,982,277 (-)MPROMDB
RGD ID:6841391
Promoter ID:MM_KWN:49064
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B4
Transcripts:ENSMUST00000047170,   ENSMUST00000108457,   ENSMUST00000108459
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36719,985,066 - 19,985,566 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1277971 AgrOrtholog
Ensembl Genes ENSMUSG00000040714 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000047170 ENTREZGENE
  ENSMUST00000047170.10 UniProtKB/Swiss-Prot
  ENSMUST00000108457 ENTREZGENE
  ENSMUST00000108457.3 UniProtKB/TrEMBL
  ENSMUST00000108458 ENTREZGENE
  ENSMUST00000108458.10 UniProtKB/Swiss-Prot
  ENSMUST00000108459 ENTREZGENE
  ENSMUST00000108459.9 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Kinesin_light UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:232943 UniProtKB/Swiss-Prot
MGD MGI:1277971 ENTREZGENE
NCBI Gene Klc3 ENTREZGENE
PANTHER KINESIN LIGHT CHAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KINESIN LIGHT CHAIN 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam TPR_12 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Klc3 PhenoGen
PRINTS KINESINLIGHT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_REGION UniProtKB/Swiss-Prot
SMART TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z710 ENTREZGENE, UniProtKB/TrEMBL
  KLC3_MOUSE UniProtKB/Swiss-Prot
  Q3TZ56 ENTREZGENE
  Q91W40 ENTREZGENE
UniProt Secondary Q3TZ56 UniProtKB/Swiss-Prot