ICE2P2 (interactor of little elongation complex ELL subunit 2 pseudogene 2) - Rat Genome Database

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Gene: ICE2P2 (interactor of little elongation complex ELL subunit 2 pseudogene 2) Homo sapiens
Analyze
Symbol: ICE2P2
Name: interactor of little elongation complex ELL subunit 2 pseudogene 2
RGD ID: 7246968
HGNC Page HGNC:48857
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: NARG2P2
Related Functional Gene: ICE2  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38388,948,198 - 88,950,993 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl388,948,142 - 88,950,928 (+)EnsemblGRCh38hg38GRCh38
GRCh37388,997,348 - 89,000,143 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36388,931,714 - 89,082,768 (+)NCBINCBI36Build 36hg18NCBI36
Celera389,751,609 - 89,754,136 (+)NCBICelera
Cytogenetic Map3p11.1NCBI
HuRef389,010,532 - 89,013,059 (+)NCBIHuRef
CHM1_1388,950,388 - 88,952,915 (+)NCBICHM1_1
T2T-CHM13v2.0389,024,291 - 89,027,086 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in ICE2P2
3 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:160
Count of miRNA genes:150
Interacting mature miRNAs:153
Transcripts:ENST00000483823
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 4 293 1
Below cutoff 165 168 115 25 104 12 316 140 233 6 144 115 13 107 216

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000483823
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl388,948,142 - 88,950,928 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC ICE2P2 COSMIC
Ensembl Genes ENSG00000242705 Ensembl, ENTREZGENE
GTEx ENSG00000242705 GTEx
HGNC ID HGNC:48857 ENTREZGENE
Human Proteome Map ICE2P2 Human Proteome Map
NCBI Gene NARG2P2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-11-12 ICE2P2  interactor of little elongation complex ELL subunit 2 pseudogene 2    interactor of little elongator complex ELL subunit 2 pseudogene 2  Symbol and/or name change 5135510 APPROVED
2014-06-10 ICE2P2  interactor of little elongator complex ELL subunit 2 pseudogene 2  NARG2P2  NMDA receptor regulated 2 pseudogene 2  Symbol and/or name change 5135510 APPROVED