LOC100910180 (60S ribosomal protein L36a-like) - Rat Genome Database

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Gene: LOC100910180 (60S ribosomal protein L36a-like) Rattus norvegicus
Analyze
Symbol: LOC100910180
Name: 60S ribosomal protein L36a-like
RGD ID: 6499811
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: large ribosomal subunit protein eL42-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X101,595,898 - 101,596,241 (-)NCBIGRCr8
mRatBN7.2X97,302,614 - 97,302,943 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X104,932,867 - 104,933,495 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X104,765,857 - 104,766,198 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX98,348,722 - 98,349,350 (-)NCBICelera
Cytogenetic MapXq32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_006257236   ⟹   XP_006257298
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X101,595,898 - 101,596,241 (-)NCBI
mRatBN7.2X97,302,614 - 97,302,943 (-)NCBI
Rnor_6.0X104,932,867 - 104,933,495 (-)NCBI
Rnor_5.0X104,765,857 - 104,766,198 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_006257298 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_006257298   ⟸   XM_006257236
- Sequence:


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1694 BioCyc
NCBI Gene LOC100910180 ENTREZGENE
PhenoGen LOC100910180 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-07-05 LOC100910180  60S ribosomal protein L36a-like      Symbol and Name status set to provisional 70820 PROVISIONAL