Rps8-ps4 (ribosomal protein S8, pseudogene 4) - Rat Genome Database
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Summary
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Genomics
Variants
QTLs in Region (GRCr8)
Expression
RNA-SEQ Expression
Sequence
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Nomenclature History
Gene: Rps8-ps4 (ribosomal protein S8, pseudogene 4) Rattus norvegicus
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Analyze
General
Array IDs
Symbol:
Rps8-ps4
Name:
ribosomal protein S8, pseudogene 4
RGD ID:
6495155
Description:
Type:
pseudo
RefSeq Status:
MODEL
Previously known as:
40S ribosomal protein S8-like; LOC100911124
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly
Chr
Position (strand)
Source
Genome Browsers
JBrowse
NCBI
UCSC
Ensembl
GRCr8
7
5,749,182 - 5,749,822 (+)
NCBI
GRCr8
mRatBN7.2
7
5,098,335 - 5,098,975 (+)
NCBI
mRatBN7.2
mRatBN7.2
Rnor_6.0
7
6,217,563 - 6,218,203 (-)
NCBI
Rnor6.0
Rnor_6.0
rn6
Rnor6.0
Rnor_5.0
7
6,324,836 - 6,325,476 (-)
NCBI
Rnor5.0
Rnor_5.0
rn5
Rnor5.0
Celera
7
3,349,822 - 3,350,462 (+)
NCBI
Celera
Cytogenetic Map
7
q11
NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
References
Genomics
.
Variants
.
Variants in Rps8-ps4
18 total Variants
QTLs in Region (GRCr8)
1 to 10 of 10 rows
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All Rows
The following
QTLs
overlap with this region.
Full Report
CSV
TAB
Printer
Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61410
Bw19
Body weight QTL 19
6.2
0.001
body mass (VT:0001259)
body weight (CMO:0000012)
7
1
44782185
Rat
1300176
Hrtrt10
Heart rate QTL 10
3.19
heart pumping trait (VT:2000009)
heart rate (CMO:0000002)
7
664270
26029351
Rat
2317047
Wbc4
White blood cell count QTL 4
0.01
leukocyte quantity (VT:0000217)
white blood cell count (CMO:0000027)
7
1
35342956
Rat
2298550
Neuinf6
Neuroinflammation QTL 6
3.3
nervous system integrity trait (VT:0010566)
spinal cord RT1-B protein level (CMO:0002132)
7
1
27829089
Rat
631503
Bp102
Blood pressure QTL 102
1.9
arterial blood pressure trait (VT:2000000)
systolic blood pressure (CMO:0000004)
7
1
44822433
Rat
634336
Anxrr17
Anxiety related response QTL 17
3.66
locomotor behavior trait (VT:0001392)
number of entries into a discrete space in an experimental apparatus (CMO:0000960)
7
924703
115097879
Rat
10755438
Coatc9
Coat color QTL 9
0
coat/hair pigmentation trait (VT:0010463)
pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)
7
3529280
48529280
Rat
724560
Plsm3
Polydactyly-luxate syndrome (PLS) morphotypes QTL 3
0.0003
tibia length (VT:0004357)
tibia length (CMO:0000450)
7
1
34000259
Rat
9590142
Scort5
Serum corticosterone level QTL 5
24.4
0.001
blood corticosterone amount (VT:0005345)
plasma corticosterone level (CMO:0001173)
7
1
31962314
Rat
7411566
Bw136
Body weight QTL 136
10.4
0.001
body mass (VT:0001259)
body weight gain (CMO:0000420)
7
1
31962314
Rat
1 to 10 of 10 rows
10
20
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100
All Rows
Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Download All Expressed Objects for this Gene
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Strain/Cell Line
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Sex
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Age
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Tissue
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Geo Sample Id
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Value
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Unit
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Assembly
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Reference
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Sequence
Nucleotide Sequences
1 to 1 of 1 rows
3
5
10
20
30
100
All Rows
GenBank Nucleotide
JAXUCZ010000007
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
1 to 1 of 1 rows
3
5
10
20
30
100
All Rows
Additional Information
External Database Links
1 to 3 of 3 rows
3
5
10
20
40
100
All Rows
Database
Acc Id
Source(s)
BioCyc Gene
G2FUF-35166
BioCyc
NCBI Gene
LOC100911124
ENTREZGENE
PhenoGen
Rps8-ps4
PhenoGen
1 to 3 of 3 rows
3
5
10
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100
All Rows
Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2022-07-08
Rps8-ps4
ribosomal protein S8, pseudogene 4
LOC100911124
40S ribosomal protein S8-like
Symbol and Name Changed
1299863
APPROVED
2012-07-05
LOC100911124
40S ribosomal protein S8-like
Symbol and Name status set to provisional
70820
PROVISIONAL