RNA5SP305 (RNA, 5S ribosomal pseudogene 305) - Rat Genome Database

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Gene: RNA5SP305 (RNA, 5S ribosomal pseudogene 305) Homo sapiens
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Symbol: RNA5SP305
Name: RNA, 5S ribosomal pseudogene 305
RGD ID: 6481728
HGNC Page HGNC:43205
Description:
Type: pseudo (Ensembl: rRNA_pseudogene)
RefSeq Status: INFERRED
Previously known as: RN5S305
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381024,640,166 - 24,640,284 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1024,640,166 - 24,640,284 (+)EnsemblGRCh38hg38GRCh38
GRCh371024,929,095 - 24,929,213 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map10p12.1NCBI
HuRef1024,590,687 - 24,590,805 (+)NCBIHuRef
CHM1_11024,929,055 - 24,929,173 (+)NCBICHM1_1
T2T-CHM13v2.01024,658,962 - 24,659,080 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

Predicted Target Of
Summary Value
Count of predictions:61
Count of miRNA genes:60
Interacting mature miRNAs:61
Transcripts:ENST00000362665
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1643515BW287_HBody Weight QTL 287 (human)2.450.0004Body weightBMI101842411044424110Human
1300009BW22_HBody weight QTL 22 (human)2.32Body weightbody mass index101842411044424110Human




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
134 184 240 157 429 160 210 2 53 80 32 275 445 465 3 293 75 177 158 22


RefSeq Transcripts NG_033451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL392104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000362665
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1024,640,166 - 24,640,284 (+)Ensembl


Database
Acc Id
Source(s)
COSMIC RNA5SP305 COSMIC
Ensembl Genes ENSG00000199535 Ensembl, ENTREZGENE
GTEx ENSG00000199535 GTEx
HGNC ID HGNC:43205 ENTREZGENE
Human Proteome Map RNA5SP305 Human Proteome Map
NCBI Gene RN5S305 ENTREZGENE


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-08-14 RNA5SP305  RNA, 5S ribosomal pseudogene 305  RN5S305  RNA, 5S ribosomal 305  Symbol and/or name change 5135510 APPROVED