WWC3-AS1 (WWC3 antisense RNA 1) - Rat Genome Database

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Gene: WWC3-AS1 (WWC3 antisense RNA 1) Homo sapiens
Analyze
Symbol: WWC3-AS1
Name: WWC3 antisense RNA 1
RGD ID: 6481417
HGNC Page HGNC:41236
Description:
Type: ncrna (Ensembl: lncRNA)
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 EnsemblX10,024,842 - 10,038,654 (-)EnsemblGRCh38hg38GRCh38
Cytogenetic MapXp22.2NCBI


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:417
Count of miRNA genes:386
Interacting mature miRNAs:406
Transcripts:ENST00000430057
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 9 21 5 1 129 43 5 45 12 28 40 1 8 17
Below cutoff 998 968 574 158 598 65 1512 616 1189 101 645 790 96 376 870 2

Sequence

Nucleotide Sequences
GenBank Nucleotide AC002365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU754164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000430057
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX10,024,842 - 10,038,654 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC WWC3-AS1 COSMIC
Ensembl Genes ENSG00000225076 Ensembl
GTEx ENSG00000225076 GTEx
HGNC ID HGNC:41236 ENTREZGENE
Human Proteome Map WWC3-AS1 Human Proteome Map
NCBI Gene WWC3-AS1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-08-21 WWC3-AS1  WWC3 antisense RNA 1  WWC3-AS1  WWC3 antisense RNA 1 (non-protein coding)  Symbol and/or name change 5135510 APPROVED