ARL2BPP5 (ARF like GTPase 2 binding protein pseudogene 5) - Rat Genome Database

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Gene: ARL2BPP5 (ARF like GTPase 2 binding protein pseudogene 5) Homo sapiens
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Symbol: ARL2BPP5
Name: ARF like GTPase 2 binding protein pseudogene 5 (Ensembl:ADP ribosylation factor like GTPase 2 binding protein pseudogene 5)
RGD ID: 6481008
HGNC Page HGNC:39449
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: ADP ribosylation factor like GTPase 2 binding protein pseudogene 5
Related Functional Gene: ARL2BP  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385162,761,833 - 162,762,313 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5162,761,833 - 162,762,313 (+)EnsemblGRCh38hg38GRCh38
GRCh375162,188,839 - 162,189,319 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map5q34NCBI
HuRef5157,288,226 - 157,288,706 (+)NCBIHuRef
CHM1_15161,621,316 - 161,621,796 (+)NCBICHM1_1
T2T-CHM13v2.05163,296,133 - 163,296,613 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

Predicted Target Of
Summary Value
Count of predictions:166
Count of miRNA genes:148
Interacting mature miRNAs:150
Transcripts:ENST00000523141
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289409BW320_HBody weight QTL 320 (human)3.50.0002Body weightlean mass5160925164181538259Human




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
1 16 20 7 47 13 17 4 5 4 12 38 19 45 11 34 9


RefSeq Transcripts NG_032305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC010602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000523141
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5162,761,833 - 162,762,313 (+)Ensembl


Database
Acc Id
Source(s)
COSMIC ARL2BPP5 COSMIC
Ensembl Genes ENSG00000254351 Ensembl, ENTREZGENE
GTEx ENSG00000254351 GTEx
HGNC ID HGNC:39449 ENTREZGENE
Human Proteome Map ARL2BPP5 Human Proteome Map
NCBI Gene ARL2BPP5 ENTREZGENE


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-10-31 ARL2BPP5  ARF like GTPase 2 binding protein pseudogene 5  ARL2BPP5  ADP ribosylation factor like GTPase 2 binding protein pseudogene 5  Symbol and/or name change 19259463 PROVISIONAL
2015-11-24 ARL2BPP5  ADP ribosylation factor like GTPase 2 binding protein pseudogene 5    ADP-ribosylation factor like GTPase 2 binding protein pseudogene 5  Symbol and/or name change 5135510 APPROVED
2015-11-17 ARL2BPP5  ADP-ribosylation factor like GTPase 2 binding protein pseudogene 5    ADP-ribosylation factor-like 2 binding protein pseudogene 5  Symbol and/or name change 5135510 APPROVED