CNOT4P1 (CCR4-NOT transcription complex subunit 4 pseudogene 1) - Rat Genome Database

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Gene: CNOT4P1 (CCR4-NOT transcription complex subunit 4 pseudogene 1) Homo sapiens
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Symbol: CNOT4P1
Name: CCR4-NOT transcription complex subunit 4 pseudogene 1
RGD ID: 6480981
HGNC Page HGNC:39272
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: CNOT4  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381320,921,664 - 20,923,233 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1320,921,664 - 20,923,233 (-)EnsemblGRCh38hg38GRCh38
GRCh371321,495,803 - 21,497,372 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map13q12.11NCBI
HuRef132,298,719 - 2,300,286 (-)NCBIHuRef
CHM1_11321,463,943 - 21,465,510 (-)NCBICHM1_1
T2T-CHM13v2.01320,114,781 - 20,116,348 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

Predicted Target Of
Summary Value
Count of predictions:332
Count of miRNA genes:319
Interacting mature miRNAs:325
Transcripts:ENST00000417432
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
40 74 430 87 603 44 75 13 78 6 520 328 242 1 132 25 328 62 7


RefSeq Transcripts NG_032240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL356285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000417432
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1320,921,664 - 20,923,233 (-)Ensembl


Database
Acc Id
Source(s)
COSMIC CNOT4P1 COSMIC
Ensembl Genes ENSG00000236704 Ensembl, ENTREZGENE
GTEx ENSG00000236704 GTEx
HGNC ID HGNC:39272 ENTREZGENE
Human Proteome Map CNOT4P1 Human Proteome Map
NCBI Gene CNOT4P1 ENTREZGENE


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-18 CNOT4P1  CCR4-NOT transcription complex subunit 4 pseudogene 1    CCR4-NOT transcription complex, subunit 4 pseudogene 1  Symbol and/or name change 5135510 APPROVED