Pkmyt1 (protein kinase, membrane associated tyrosine/threonine 1) - Rat Genome Database

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Gene: Pkmyt1 (protein kinase, membrane associated tyrosine/threonine 1) Rattus rattus
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Symbol: Pkmyt1
Name: protein kinase, membrane associated tyrosine/threonine 1
RGD ID: 626120538
Description: ENCODES a protein that exhibits kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Rrattus_CSIRO_v1 - Rrattus_CSIRO_v1 Assembly
Position:
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v191,024,926 - 1,035,285 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Pkmyt1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v191,024,926 - 1,035,285 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1
PKMYT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38162,972,808 - 2,980,446 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl162,968,024 - 2,980,813 (-)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh37163,022,809 - 3,030,447 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36162,962,793 - 2,970,475 (-)NCBIBuild 36Build 36hg18NCBI36
Celera163,228,238 - 3,235,920 (-)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef162,995,283 - 3,002,445 (-)NCBIHuRef
CHM1_1163,022,772 - 3,030,521 (-)NCBICHM1_1
T2T-CHM13v2.0162,999,487 - 3,007,174 (-)NCBIT2T-CHM13v2.0
Pkmyt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391723,945,385 - 23,955,709 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1723,945,254 - 23,955,710 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381723,726,336 - 23,736,735 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1723,726,336 - 23,736,735 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv371723,863,303 - 23,873,696 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361723,454,063 - 23,464,364 (+)NCBIMGSCv36mm8
Celera1724,220,014 - 24,230,508 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.02NCBI
Pkmyt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81013,252,805 - 13,263,584 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1013,252,816 - 13,264,263 (+)EnsemblGRCr8
mRatBN7.21012,748,221 - 12,758,995 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1012,748,237 - 12,758,995 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1017,492,526 - 17,503,316 (+)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01016,981,319 - 16,992,106 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01012,480,898 - 12,491,719 (+)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1016,176,527 - 16,187,360 (+)NCBI
Lyon_Normotensive1016,836,235 - 16,847,059 (+)NCBI
Lyon_Hypertensive1018,529,857 - 18,540,683 (+)NCBI
F344_StmMcwi1018,520,769 - 18,531,591 (+)NCBI
Rnor_6.01013,061,077 - 13,072,277 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,061,170 - 13,073,283 (+)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.01012,880,557 - 12,891,739 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41012,982,319 - 12,993,706 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1012,443,567 - 12,454,296 (+)NCBICelera
RGSC_v3.11012,982,318 - 12,993,697 (+)NCBI
Cytogenetic Map10q12NCBI
Pkmyt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544214,364,031 - 14,372,365 (+)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_00495544214,368,110 - 14,372,365 (+)NCBIChiLan1.0ChiLan1.0
PKMYT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2183,517,578 - 3,549,487 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1167,295,971 - 7,327,895 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0161,914,651 - 1,946,407 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1163,086,713 - 3,094,475 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl163,082,265 - 3,094,477 (-)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
PKMYT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,200,445 - 38,210,458 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl638,200,322 - 38,210,414 (+)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha639,440,999 - 39,450,948 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0638,511,079 - 38,521,031 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl638,510,937 - 38,520,987 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1638,196,845 - 38,206,793 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,169,331 - 38,179,322 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0638,645,560 - 38,655,092 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pkmyt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap110137,971,491 - 137,979,798 (-)NCBImIctTri1.hap1
HiC_Itri_2NW_024409344105,512,794 - 105,521,087 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366941,188,442 - 1,199,079 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366941,191,534 - 1,196,532 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PKMYT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl339,201,878 - 39,210,125 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1339,201,819 - 39,209,261 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2340,490,568 - 40,496,602 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PKMYT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap152,971,757 - 2,980,974 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366606828,112,937 - 28,122,125 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.152,712,423 - 2,722,122 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl52,712,448 - 2,716,661 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Pkmyt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624824715,818 - 724,535 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_004624824715,770 - 724,530 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl2346,169,151 - 46,179,838 (-)Ensembl


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_032912463   ⟹   XP_032768354
Type: CODING
Position:
Black Rat AssemblyChrPosition (strand)Source
Rrattus_CSIRO_v191,024,926 - 1,035,285 (+)NCBI
RefSeq Acc Id: XR_004389044
Type: NON-CODING
Position:
Black Rat AssemblyChrPosition (strand)Source
Rrattus_CSIRO_v191,024,926 - 1,035,285 (+)NCBI
Protein Sequences
Protein RefSeqs XP_032768354 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_032768354   ⟸   XM_032912463


Additional Information

Database Acc Id Source(s)
NCBI Gene Pkmyt1 ENTREZGENE