Enc1 (ectodermal-neural cortex 1) - Rat Genome Database

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Gene: Enc1 (ectodermal-neural cortex 1) Rattus rattus
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Symbol: Enc1
Name: ectodermal-neural cortex 1
RGD ID: 626022524
Description: INVOLVED IN negative regulation of translation (ortholog); positive regulation of neuron projection development (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ectoderm-neural cortex protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Rrattus_CSIRO_v1 - Rrattus_CSIRO_v1 Assembly
Position:
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v13199,374,620 - 199,380,182 (-)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Enc1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v13199,374,620 - 199,380,182 (-)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1
ENC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38574,627,409 - 74,640,728 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl574,627,406 - 74,641,424 (-)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh37573,923,234 - 73,936,553 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36573,958,990 - 73,972,273 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34573,958,990 - 73,972,273NCBI
Celera569,818,021 - 69,832,031 (-)NCBICelera
Cytogenetic Map5q13.3NCBI
HuRef569,128,052 - 69,142,065 (-)NCBIHuRef
CHM1_1573,355,796 - 73,369,813 (-)NCBICHM1_1
T2T-CHM13v2.0575,108,382 - 75,121,693 (-)NCBIT2T-CHM13v2.0
Enc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391397,377,613 - 97,389,548 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1397,377,605 - 97,389,547 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381397,241,105 - 97,253,040 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1397,241,105 - 97,253,034 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv371398,011,060 - 98,022,995 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361398,341,869 - 98,353,733 (+)NCBIMGSCv36mm8
Celera13100,873,931 - 100,885,879 (+)NCBICelera
Cytogenetic Map13D1NCBI
cM Map1350.66NCBI
Enc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8230,285,274 - 30,297,194 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl230,283,736 - 30,315,721 (+)EnsemblGRCr8
mRatBN7.2228,550,670 - 28,562,591 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl228,550,464 - 28,562,713 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx235,605,171 - 35,617,034 (+)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0233,699,505 - 33,711,368 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0228,519,264 - 28,531,129 (+)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd230,410,164 - 30,422,061 (+)NCBI
Lyon_Normotensive230,429,562 - 30,441,459 (+)NCBI
Lyon_Hypertensive230,338,436 - 30,350,319 (+)NCBI
F344_StmMcwi230,245,224 - 30,257,089 (+)NCBI
Rnor_6.0228,049,217 - 28,061,023 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl228,049,217 - 28,061,029 (+)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.0247,160,036 - 47,171,842 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4227,720,805 - 27,733,168 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera224,591,966 - 24,603,770 (+)NCBICelera
RGSC_v3.1227,364,788 - 27,653,537 (+)NCBI
Cytogenetic Map2q12NCBI
Enc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542526,017,684 - 26,029,262 (+)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_00495542526,017,684 - 26,029,262 (+)NCBIChiLan1.0ChiLan1.0
ENC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2440,671,223 - 40,684,243 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1538,824,858 - 38,837,878 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0540,668,899 - 40,682,887 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1541,276,022 - 41,290,189 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl541,281,115 - 41,282,884 (+)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
ENC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1257,175,851 - 57,184,445 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl257,182,480 - 57,184,249 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha254,153,002 - 54,164,687 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0257,699,330 - 57,711,010 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl257,701,049 - 57,710,976 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1254,763,393 - 54,775,077 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0255,526,509 - 55,538,190 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0256,423,533 - 56,435,224 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Enc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap1184,402,459 - 84,415,097 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_024407213188,837,852 - 188,850,667 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365492,008,363 - 2,020,948 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365492,008,365 - 2,020,948 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ENC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl283,678,521 - 83,691,400 (-)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1283,678,518 - 83,691,812 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2285,271,292 - 85,284,204 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ENC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap1422,234,959 - 22,247,930 (+)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366604917,758,086 - 17,772,066 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.1468,980,137 - 68,994,112 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl468,987,452 - 68,989,218 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Enc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624924281,251 - 294,248 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_004624924281,327 - 294,248 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl1659,998,707 - 60,102,623 (+)Ensembl


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_032898998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAAIVD010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_032898998   ⟹   XP_032754889
Type: CODING
Position:
Black Rat AssemblyChrPosition (strand)Source
Rrattus_CSIRO_v13199,374,620 - 199,380,182 (-)NCBI
Protein Sequences
Protein RefSeqs XP_032754889 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_032754889   ⟸   XM_032898998


Additional Information

Database Acc Id Source(s)
NCBI Gene Enc1 ENTREZGENE