Symbol: |
SNRPEP4 |
Name: |
SNRPE pseudogene 4 |
RGD ID: |
5553007 |
HGNC Page |
HGNC:43446 |
Description: |
INTERACTS WITH aristolochic acid A |
Type: |
pseudo (Ensembl: processed_pseudogene)
|
RefSeq Status: |
INFERRED |
Previously known as: |
small nuclear ribonucleoprotein polypeptide E pseudogene 4 |
Related Functional Gene: |
SNRPE
|
Latest Assembly: |
GRCh38 - Human Genome Assembly GRCh38 |
Position: |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 19 | 5,576,486 - 5,576,951 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 5,576,660 - 5,576,938 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 5,576,497 - 5,576,962 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 5,527,517 - 5,527,962 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 19 | 5,513,844 - 5,514,313 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | p13.3 | NCBI | | | | | HuRef | 19 | 5,337,613 - 5,338,082 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 5,576,066 - 5,576,535 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 5,563,169 - 5,563,634 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
JBrowse: |
View Region in Genome Browser (JBrowse)
|
Model |
|
.
Predicted Target Of
Count of predictions: | 27 | Count of miRNA genes: | 27 | Interacting mature miRNAs: | 27 | Transcripts: | ENST00000435815 | Prediction methods: | Miranda, Rnahybrid | Result types: | miRGate_prediction |
1298499 | UAE1_H | Urinary albumin excretion QTL 1 (human) | 2.73 | 0.0009 | Urinary albumin excretion | urine albumin:creatinine ratio (ACR) | 19 | 1 | 16075902 | Human | 1643451 | SLIPL6_H | Serum lipid level QTL 6 (human) | 2.19 | 0.0008 | Lipid level | | 19 | 1 | 16075902 | Human | 1581534 | BP76_H | Blood pressure QTL 76 (human) | 2 | 0.001 | Blood pressure | pulse pressure | 19 | 1 | 16075902 | Human | 1581535 | BP65_H | Blood pressure QTL 65 (human) | 3.1 | 0.001 | Blood pressure | pulse pressure | 19 | 1 | 16075902 | Human | 2314591 | INSUL4_H | Insulin level QTL 4 (human) | 3.8 | 0.000038 | Insulin level | fasting | 19 | 1 | 16075902 | Human | 1298476 | BP3_H | Blood pressure QTL 3 (human) | 2.4 | | Blood pressure | systolic | 19 | 1 | 16075902 | Human |
D1S3358 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
---|
GRCh37 | 19 | 5,576,546 - 5,576,661 | UniSTS | GRCh37 | GRCh37 | 1 | 203,839,070 - 203,839,185 | UniSTS | GRCh37 | Build 36 | 1 | 202,105,693 - 202,105,808 | RGD | NCBI36 | Celera | 1 | 176,974,417 - 176,974,532 | RGD | | Celera | 19 | 5,513,897 - 5,514,012 | UniSTS | | Cytogenetic Map | 1 | q32 | UniSTS | | Cytogenetic Map | 19 | p13.3 | UniSTS | | HuRef | 19 | 5,337,666 - 5,337,781 | UniSTS | | HuRef | 1 | 175,005,166 - 175,005,281 | UniSTS | | Whitehead-YAC Contig Map | 1 | | UniSTS | |
|
|
alimentary part of gastrointestinal system
| | | | | |
entire extraembryonic component
| | | | | | | | | | | | |
1203
|
2414
|
2777
|
2208
|
4866
|
1679
|
2296
|
4
|
579
|
1830
|
422
|
2264
|
7046
|
6294
|
51
|
3635
|
827
|
1710
|
1605
|
168
|
Ensembl Acc Id: |
ENST00000435815 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
GRCh38.p14 Ensembl | 19 | 5,576,660 - 5,576,938 (-) | Ensembl |
|
RefSeq Acc Id: |
XM_001726381 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
---|
Build 36 | 19 | 5,527,517 - 5,527,962 (-) | NCBI Archive |
|
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2019-12-25 |
SNRPEP4 |
SNRPE pseudogene 4 |
SNRPEP4 |
small nuclear ribonucleoprotein polypeptide E pseudogene 4 |
Symbol and/or name change |
5135510 |
APPROVED |
|
|