KRT8P32 (keratin 8 pseudogene 32) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: KRT8P32 (keratin 8 pseudogene 32) Homo sapiens
Analyze
Symbol: KRT8P32
Name: keratin 8 pseudogene 32
RGD ID: 5130834
HGNC Page HGNC:39866
Description: INTERACTS WITH perfluorooctane-1-sulfonic acid
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: KRT8  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38598,391,816 - 98,393,610 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl598,392,070 - 98,393,530 (-)EnsemblGRCh38hg38GRCh38
GRCh37597,727,520 - 97,729,314 (-)NCBIGRCh37GRCh37hg19GRCh37
Celera593,611,803 - 93,613,531 (-)NCBICelera
Cytogenetic Map5q15NCBI
HuRef592,920,733 - 92,922,527 (-)NCBIHuRef
CHM1_1597,160,164 - 97,161,958 (-)NCBICHM1_1
T2T-CHM13v2.0598,895,035 - 98,896,829 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
KRT8P32Humanperfluorooctane-1-sulfonic acid increases expressionEXP 6480464perfluorooctane sulfonic acid results in increased expression of KRT8P32 mRNACTDPMID:27153767



.

Predicted Target Of
Summary Value
Count of predictions:406
Count of miRNA genes:365
Interacting mature miRNAs:403
Transcripts:ENST00000512863
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
216 1232 278 444 619 762 1128 271 230 170 333 1601 1227 5 322 347 801 850 104


RefSeq Transcripts NG_021858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC094106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000512863
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl598,392,070 - 98,393,530 (-)Ensembl


Database
Acc Id
Source(s)
COSMIC KRT8P32 COSMIC
Ensembl Genes ENSG00000250221 Ensembl, ENTREZGENE
GTEx ENSG00000250221 GTEx
HGNC ID HGNC:39866 ENTREZGENE
Human Proteome Map KRT8P32 Human Proteome Map
NCBI Gene 100289133 ENTREZGENE