LOC120095444 (small nucleolar RNA SNORA17) - Rat Genome Database

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Gene: LOC120095444 (small nucleolar RNA SNORA17) Rattus norvegicus
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Symbol: LOC120095444
Name: small nucleolar RNA SNORA17
RGD ID: 41184374
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: AABR07029275.2; AABR07029275.3
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81019,805,344 - 19,805,471 (-)NCBIGRCr8
mRatBN7.21019,301,212 - 19,301,339 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1019,301,212 - 19,301,339 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl1019,660,002 - 19,660,129 (-)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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1 to 10 of 32 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
6893352Bw100Body weight QTL 1000.330.6body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
631564Apr3Acute phase response QTL 33.9blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)101527595560275955Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10538701450387014Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10538701450387014Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
1354587Kidm21Kidney mass QTL 213.3kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)101502851360430477Rat
6893350Bw99Body weight QTL 990.870.16body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat

1 to 10 of 32 rows





RefSeq Transcripts XR_005490916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000091968
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1019,301,212 - 19,301,339 (-)Ensembl
RefSeq Acc Id: XR_005490916
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81019,805,344 - 19,805,471 (-)NCBI
mRatBN7.21019,301,212 - 19,301,339 (-)NCBI

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-25580 BioCyc
Ensembl Genes ENSRNOG00000059399 Ensembl
NCBI Gene LOC120095444 ENTREZGENE
PhenoGen LOC120095444 PhenoGen
RatGTEx ENSRNOG00000059399 RatGTEx
RNAcentral URS00006CFB0A RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120095444  small nucleolar RNA SNORA17  AABR07029275.2    Data merged from RGD:15012536 737654 PROVISIONAL
2021-01-27 LOC120095444  small nucleolar RNA SNORA17      Symbol and Name status set to provisional 70820 PROVISIONAL
2020-02-07 AABR07029275.2    AABR07029275.3    Symbol and/or name change 19259462 PROVISIONAL