LOC120094491 (small nucleolar RNA SNORA17) - Rat Genome Database

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Gene: LOC120094491 (small nucleolar RNA SNORA17) Rattus norvegicus
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Symbol: LOC120094491
Name: small nucleolar RNA SNORA17
RGD ID: 41131898
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: AC118127.1
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8875,373,136 - 75,373,265 (-)NCBIGRCr8
mRatBN7.2866,478,033 - 66,478,162 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl866,478,033 - 66,478,162 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl871,593,706 - 71,593,835 (-)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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1 to 10 of 56 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83085640475856404Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)84186687686866876Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84269268490165460Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83173772976737729Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83558203280582032Rat
4889938Bss89Bone structure and strength QTL 893.8tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)85009524982460899Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)830848154101699754Rat

1 to 10 of 56 rows





RefSeq Transcripts XR_005488797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000078605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl866,478,033 - 66,478,162 (-)Ensembl
RefSeq Acc Id: XR_005488797
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8875,373,136 - 75,373,265 (-)NCBI
mRatBN7.2866,478,033 - 66,478,162 (-)NCBI

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-30036 BioCyc
Ensembl Genes ENSRNOG00000060922 Ensembl
NCBI Gene LOC120094491 ENTREZGENE
PhenoGen LOC120094491 PhenoGen
RatGTEx ENSRNOG00000060922 RatGTEx
RNAcentral URS00006A2212 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120094491  small nucleolar RNA SNORA17  AC118127.1    Data merged from RGD:15013699 737654 PROVISIONAL
2021-01-27 LOC120094491  small nucleolar RNA SNORA17      Symbol and Name status set to provisional 70820 PROVISIONAL
2019-11-08 AC118127.1        Symbol and Name status set to provisional 45752 PROVISIONAL