MTND1P1 (MT-ND1 pseudogene 1) - Rat Genome Database

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Gene: MTND1P1 (MT-ND1 pseudogene 1) Homo sapiens
Analyze
Symbol: MTND1P1
Name: MT-ND1 pseudogene 1
RGD ID: 4110706
HGNC Page HGNC:38728
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 1
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38Y8,371,663 - 8,372,030 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblY8,371,663 - 8,372,030 (+)EnsemblGRCh38hg38GRCh38
GRCh37Y8,239,704 - 8,240,071 (+)NCBIGRCh37GRCh37hg19GRCh37
CeleraY981,670 - 982,037 (-)NCBICelera
Cytogenetic MapYp11.2NCBI
HuRefY5,807,473 - 5,807,840 (+)NCBIHuRef
T2T-CHM13v2.0Y8,027,588 - 8,027,955 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:9847074  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:49
Count of miRNA genes:49
Interacting mature miRNAs:49
Transcripts:ENST00000445453
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

circulatory system hemolymphoid system integumental system musculoskeletal system nervous system reproductive system respiratory system appendage
High
Medium
Low 1
Below cutoff 4 1 13 2 3 9 1 7

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000445453
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY8,371,663 - 8,372,030 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MTND1P1 COSMIC
Ensembl Genes ENSG00000226529 Ensembl, ENTREZGENE
GTEx ENSG00000226529 GTEx
HGNC ID HGNC:38728 ENTREZGENE
Human Proteome Map MTND1P1 Human Proteome Map
NCBI Gene 100499468 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-06-05 MTND1P1  MT-ND1 pseudogene 1    mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 1  Symbol and/or name change 5135510 APPROVED
2015-11-24 MTND1P1  mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 1    MT-ND1 pseudogene 1  Symbol and/or name change 5135510 APPROVED
2011-07-27 MTND1P1  MT-ND1 pseudogene 1  MTND1P1  MTND1 pseudogene 1  Symbol and/or name change 5135510 APPROVED