LOC120102063 (small nucleolar RNA SNORA17) - Rat Genome Database

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Gene: LOC120102063 (small nucleolar RNA SNORA17) Rattus norvegicus
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Symbol: LOC120102063
Name: small nucleolar RNA SNORA17
RGD ID: 40939342
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: AC106933.1
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83118,947,531 - 118,947,658 (+)NCBIGRCr8
mRatBN7.2398,493,029 - 98,493,156 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl398,493,029 - 98,493,156 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl3103,099,585 - 103,099,712 (+)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map3q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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1 to 10 of 39 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2301414Kidm37Kidney mass QTL 370.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)370653097121056321Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)353184593115665732Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)338192233133483320Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)329463235118376539Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
1582219Bw63Body weight QTL 633.80.001body mass (VT:0001259)body weight (CMO:0000012)396127817115665732Rat
1582221Kidm30Kidney mass QTL 303.50.0008kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)364655305115665732Rat

1 to 10 of 39 rows





RefSeq Transcripts XR_005503095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000084489
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl398,493,029 - 98,493,156 (+)Ensembl
RefSeq Acc Id: XR_005503095
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83118,947,531 - 118,947,658 (+)NCBI
mRatBN7.2398,493,029 - 98,493,156 (+)NCBI

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-48420 BioCyc
Ensembl Genes ENSRNOG00000055303 Ensembl
NCBI Gene LOC120102063 ENTREZGENE
PhenoGen LOC120102063 PhenoGen
RatGTEx ENSRNOG00000055303 RatGTEx
RNAcentral URS00006DAD0A RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120102063  small nucleolar RNA SNORA17  AC106933.1    Data merged from RGD:15009357 737654 PROVISIONAL
2021-01-26 LOC120102063  small nucleolar RNA SNORA17      Symbol and Name status set to provisional 70820 PROVISIONAL
2019-11-08 AC106933.1        Symbol and Name status set to provisional 45752 PROVISIONAL