C34H3orf80 (chromosome 34 C3orf80 homolog) - Rat Genome Database

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Gene: C34H3orf80 (chromosome 34 C3orf80 homolog) Canis lupus familiaris
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Symbol: C34H3orf80
Name: chromosome 34 C3orf80 homolog (Ensembl:chromosome 3 open reading frame 80)
RGD ID: 40912049
Description: FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized membrane protein C3orf80 homolog
RGD Orthologs
Human
Mouse
Rat
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha3430,350,299 - 30,351,325 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03426,364,398 - 26,365,419 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3426,364,398 - 26,365,093 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13426,294,357 - 26,295,375 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03426,255,193 - 26,256,166 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03426,495,214 - 26,496,194 (+)NCBIUU_Cfam_GSD_1.0



Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
C34H3orf80Dogmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043



C34H3orf80
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha3430,350,299 - 30,351,325 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03426,364,398 - 26,365,419 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3426,364,398 - 26,365,093 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13426,294,357 - 26,295,375 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03426,255,193 - 26,256,166 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03426,495,214 - 26,496,194 (+)NCBIUU_Cfam_GSD_1.0
C3orf80
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383160,225,422 - 160,228,213 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3160,225,422 - 160,228,213 (+)EnsemblGRCh38hg38GRCh38
GRCh373159,943,209 - 159,946,000 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363161,425,777 - 161,428,694 (+)NCBINCBI36Build 36hg18NCBI36
Celera3158,364,792 - 158,367,369 (+)NCBICelera
Cytogenetic Map3q25.33NCBI
HuRef3157,342,144 - 157,344,648 (+)NCBIHuRef
CHM1_13159,906,643 - 159,909,220 (+)NCBICHM1_1
T2T-CHM13v2.03163,000,019 - 163,002,810 (+)NCBIT2T-CHM13v2.0
1110032F04Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39368,776,684 - 68,779,496 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl368,776,919 - 68,779,496 (+)EnsemblGRCm39 Ensembl
GRCm38368,869,586 - 68,872,163 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl368,869,586 - 68,872,163 (+)EnsemblGRCm38mm10GRCm38
MGSCv37368,673,508 - 68,676,085 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36368,956,550 - 68,960,092 (+)NCBIMGSCv36mm8
Celera368,982,228 - 68,984,806 (+)NCBICelera
Cytogenetic Map3E1NCBI
cM Map332.06NCBI
C2h3orf80
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82155,435,287 - 155,438,099 (+)NCBIGRCr8
mRatBN7.22153,125,312 - 153,128,124 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2153,125,676 - 153,126,419 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2160,254,955 - 160,257,770 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02158,305,482 - 158,308,297 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02152,938,248 - 152,941,063 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02165,486,809 - 165,489,356 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2165,486,910 - 165,487,653 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02184,847,604 - 184,850,129 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42158,872,555 - 158,873,421 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2147,476,281 - 147,478,828 (+)NCBICelera
Cytogenetic Map2q32NCBI
C2H3orf80
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22158,158,011 - 158,169,366 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13158,162,732 - 158,174,099 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03157,247,154 - 157,250,297 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13165,295,538 - 165,296,975 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3165,296,161 - 165,296,902 (+)Ensemblpanpan1.1panPan2
CUNH3orf80
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560292,173,596 - 92,176,652 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936708211,768 - 212,517 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936708211,593 - 213,700 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C13H3orf80
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1399,925,375 - 99,928,684 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11399,924,886 - 99,928,687 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
CUNH3orf80
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11530,606,300 - 30,609,710 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1530,608,491 - 30,609,234 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660413,134,107 - 3,137,115 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CUNH3orf80
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473037,980,908 - 37,981,630 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473037,980,820 - 37,983,370 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.






Ensembl Acc Id: ENSCAFT00845048010   ⟹   ENSCAFP00845037672
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3426,364,398 - 26,365,093 (+)Ensembl
RefSeq Acc Id: XM_038445925   ⟹   XP_038301853
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03426,364,398 - 26,365,419 (+)NCBI
RefSeq Acc Id: XM_038462929   ⟹   XP_038318857
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3430,350,299 - 30,351,325 (+)NCBI
RefSeq Acc Id: XM_038520121   ⟹   XP_038376049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13426,294,357 - 26,295,375 (+)NCBI
RefSeq Acc Id: XM_038583274   ⟹   XP_038439202
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03426,495,214 - 26,496,194 (+)NCBI
RefSeq Acc Id: XM_038648164   ⟹   XP_038504092
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03426,255,193 - 26,256,166 (+)NCBI
1 to 10 of 10 rows
Protein RefSeqs XP_038301853 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318857 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376049 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439202 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504092 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000075033.1
  ENSCAFP00030024928.1
  ENSCAFP00040034817.1
  ENSCAFP00845037672
  ENSCAFP00845037672.1
1 to 10 of 10 rows
RefSeq Acc Id: XP_038376049   ⟸   XM_038520121
RefSeq Acc Id: XP_038504092   ⟸   XM_038648164
RefSeq Acc Id: XP_038301853   ⟸   XM_038445925
- UniProtKB: A0A8I3PXR9 (UniProtKB/TrEMBL),   A0A8P0PSG3 (UniProtKB/TrEMBL),   A0A8C0NFG2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318857   ⟸   XM_038462929
- UniProtKB: A0A8I3PXR9 (UniProtKB/TrEMBL),   A0A8P0PSG3 (UniProtKB/TrEMBL),   A0A8C0NFG2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439202   ⟸   XM_038583274
- UniProtKB: A0A8C0NFG2 (UniProtKB/TrEMBL),   A0A8C0TF74 (UniProtKB/TrEMBL)



1 to 18 of 18 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000059141 UniProtKB/TrEMBL
  ENSCAFG00030015507 UniProtKB/TrEMBL
  ENSCAFG00040021495 UniProtKB/TrEMBL
  ENSCAFG00845027247 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000102170.1 UniProtKB/TrEMBL
  ENSCAFT00030028583.1 UniProtKB/TrEMBL
  ENSCAFT00040039894.1 UniProtKB/TrEMBL
  ENSCAFT00845048010 ENTREZGENE
  ENSCAFT00845048010.1 UniProtKB/TrEMBL
InterPro DUF4719 UniProtKB/TrEMBL
NCBI Gene C34H3orf80 ENTREZGENE
PANTHER HYPOTHETICAL PROTEIN LOC100362176 UniProtKB/TrEMBL
  PTHR38505 UniProtKB/TrEMBL
Pfam DUF4719 UniProtKB/TrEMBL
UniProt A0A8C0NFG2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TF74 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PXR9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PSG3 ENTREZGENE, UniProtKB/TrEMBL
1 to 18 of 18 rows