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Gene: CUNH3orf80 (chromosome unknown C3orf80 homolog) Heterocephalus glaber

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Symbol:

CUNH3orf80 (Ensembl: C3orf80)

Name:

chromosome unknown C3orf80 homolog

RGD ID:

18910197

Description:

FOUND IN membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

uncharacterized membrane protein C3orf80 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	37,980,908 - 37,981,630 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	37,980,820 - 37,983,370 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
CUNH3orf80	Naked Mole-Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043

PMID:21993625

CUNH3orf80
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	37,980,908 - 37,981,630 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	37,980,820 - 37,983,370 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

C3orf80
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	160,225,422 - 160,228,213 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	160,225,422 - 160,228,213 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	159,943,209 - 159,946,000 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	161,425,777 - 161,428,694 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	158,364,792 - 158,367,369 (+)	NCBI		Celera
Cytogenetic Map	3	q25.33	NCBI
HuRef	3	157,342,144 - 157,344,648 (+)	NCBI		HuRef
CHM1_1	3	159,906,643 - 159,909,220 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	163,000,019 - 163,002,810 (+)	NCBI		T2T-CHM13v2.0

1110032F04Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	68,776,684 - 68,779,496 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	68,776,919 - 68,779,496 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	68,869,586 - 68,872,163 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	68,869,586 - 68,872,163 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	68,673,508 - 68,676,085 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	68,956,550 - 68,960,092 (+)	NCBI		MGSCv36	mm8
Celera	3	68,982,228 - 68,984,806 (+)	NCBI		Celera
Cytogenetic Map	3	E1	NCBI
cM Map	3	32.06	NCBI

C2h3orf80
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	155,435,287 - 155,438,099 (+)	NCBI		GRCr8
mRatBN7.2	2	153,125,312 - 153,128,124 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	153,125,676 - 153,126,419 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	160,254,955 - 160,257,770 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	158,305,482 - 158,308,297 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	152,938,248 - 152,941,063 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	165,486,809 - 165,489,356 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	165,486,910 - 165,487,653 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	184,847,604 - 184,850,129 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	158,872,555 - 158,873,421 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	147,476,281 - 147,478,828 (+)	NCBI		Celera
Cytogenetic Map	2	q32	NCBI

C2H3orf80
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	158,158,011 - 158,169,366 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	158,162,732 - 158,174,099 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	157,247,154 - 157,250,297 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	165,295,538 - 165,296,975 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	165,296,161 - 165,296,902 (+)	Ensembl	panpan1.1		panPan2

C34H3orf80
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Dog10K_Boxer_Tasha	34	30,350,299 - 30,351,325 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	26,364,398 - 26,365,419 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	26,364,398 - 26,365,093 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	26,294,357 - 26,295,375 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	26,255,193 - 26,256,166 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	26,495,214 - 26,496,194 (+)	NCBI		UU_Cfam_GSD_1.0

CUNH3orf80
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	92,173,596 - 92,176,652 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936708	211,768 - 212,517 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936708	211,593 - 213,700 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C13H3orf80
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	99,925,375 - 99,928,684 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	99,924,886 - 99,928,687 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CUNH3orf80
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	30,606,300 - 30,609,710 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	30,608,491 - 30,609,234 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	3,134,107 - 3,137,115 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_004834530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AHKG01001763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH172109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSHGLT00000029126 ⟹ ENSHGLP00000028600

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla_female_1.0 Ensembl	NW_004624730	37,980,908 - 37,981,630 (+)	Ensembl

RefSeq Acc Id:

XM_004834530 ⟹ XP_004834587

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624730	37,980,820 - 37,983,370 (+)	NCBI


Protein RefSeqs	XP_004834587	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EHB13438	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSHGLP00000028600

RefSeq Acc Id:	XP_004834587 ⟸ XM_004834530
- UniProtKB:	G5BVX6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSHGLP00000028600 ⟸ ENSHGLT00000029126

Database	Acc Id	Source(s)
Ensembl Genes	ENSHGLG00000020916	Ensembl, ENTREZGENE
Ensembl Transcript	ENSHGLT00000029126	ENTREZGENE
InterPro	DUF4719	UniProtKB/TrEMBL
KEGG Report	hgl:101702095	UniProtKB/TrEMBL
NCBI Gene	CUNH3orf80	ENTREZGENE
PANTHER	HYPOTHETICAL PROTEIN LOC100362176	UniProtKB/TrEMBL
	PTHR38505	UniProtKB/TrEMBL
Pfam	DUF4719	UniProtKB/TrEMBL
UniProt	G5BVX6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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