LOC119876809 (interferon alpha-1/2) - Rat Genome Database

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Gene: LOC119876809 (interferon alpha-1/2) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: LOC119876809
Name: interferon alpha-1/2
RGD ID: 40910618
Description: ENCODES a protein that exhibits cytokine activity (inferred); cytokine receptor binding (inferred); INVOLVED IN defense response (inferred); defense response to virus (inferred); signal transduction (inferred); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ROS_Cfam_1.01141,709,824 - 41,710,557 (-)NCBIROS_Cfam_1.0
UU_Cfam_GSD_1.01140,860,459 - 40,861,158 (-)NCBIUU_Cfam_GSD_1.0


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038552520   ⟹   XP_038408448
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01140,860,459 - 40,861,158 (-)NCBI
RefSeq Acc Id: XM_038681860   ⟹   XP_038537788
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01141,709,824 - 41,710,557 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038408448 (Get FASTA)   NCBI Sequence Viewer  
  XP_038537788 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00030006318.1
  ENSCAFP00845022513
  ENSCAFP00845022513.1
Reference Protein Sequences
RefSeq Acc Id: XP_038537788   ⟸   XM_038681860
- UniProtKB: A0A8I3NZD7 (UniProtKB/TrEMBL),   A0A8C0RC53 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408448   ⟸   XM_038552520
- UniProtKB: P81255 (UniProtKB/Swiss-Prot),   A0A8C0LCC4 (UniProtKB/TrEMBL),   A0A8C0RC53 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00030003911 UniProtKB/TrEMBL
  ENSCAFG00845016083 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00030007210.1 UniProtKB/TrEMBL
  ENSCAFT00845028608 ENTREZGENE
  ENSCAFT00845028608.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.10 UniProtKB/TrEMBL
InterPro 4_helix_cytokine-like_core UniProtKB/TrEMBL
  Interferon_alpha/beta/delta UniProtKB/TrEMBL
NCBI Gene LOC119876809 ENTREZGENE
PANTHER INTERFERON ALPHA-5 UniProtKB/TrEMBL
  PTHR11691 UniProtKB/TrEMBL
Pfam Interferon UniProtKB/TrEMBL
PRINTS INTERFERONAB UniProtKB/TrEMBL
PROSITE INTERFERON_A_B_D UniProtKB/TrEMBL
SMART IFabd UniProtKB/TrEMBL
Superfamily-SCOP SSF47266 UniProtKB/TrEMBL
UniProt A0A8C0LCC4 ENTREZGENE
  A0A8C0RC53 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NZD7 ENTREZGENE, UniProtKB/TrEMBL
  P81255 ENTREZGENE