LOC119866289 (small nucleolar RNA SNORA77) - Rat Genome Database

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Gene: LOC119866289 (small nucleolar RNA SNORA77) Canis lupus familiaris
Analyze
Symbol: LOC119866289
Name: small nucleolar RNA SNORA77
RGD ID: 40909450
Description: ASSOCIATED WITH autistic disorder (ortholog); chromosome 22q11.2 deletion syndrome, distal (ortholog); chromosome 22q11.2 microduplication syndrome (ortholog)
Type: snorna
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha2629,171,282 - 29,171,407 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02630,616,409 - 30,616,534 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12628,664,254 - 28,664,379 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02628,289,618 - 28,289,743 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02629,374,610 - 29,374,735 (-)NCBIUU_Cfam_GSD_1.0


References

Genomics

Comparative Map Data
LOC119866289
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha2629,171,282 - 29,171,407 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02630,616,409 - 30,616,534 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12628,664,254 - 28,664,379 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02628,289,618 - 28,289,743 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02629,374,610 - 29,374,735 (-)NCBIUU_Cfam_GSD_1.0
SNORA77B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382220,126,402 - 20,126,526 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2220,126,402 - 20,126,526 (+)EnsemblGRCh38hg38GRCh38
GRCh372220,113,925 - 20,114,049 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map22q11.21NCBI
T2T-CHM13v2.02220,505,438 - 20,505,562 (+)NCBIT2T-CHM13v2.0
Gm25777
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391618,058,581 - 18,058,706 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1618,058,581 - 18,058,706 (-)EnsemblGRCm39 Ensembl
GRCm381618,240,717 - 18,240,842 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1618,240,717 - 18,240,842 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map16A3NCBI
Snora77b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81196,254,276 - 96,254,400 (+)NCBIGRCr8
mRatBN7.21182,749,967 - 82,750,091 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1182,749,967 - 82,750,091 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl1186,897,949 - 86,898,073 (+)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map11q23NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_005302751
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02630,616,409 - 30,616,534 (-)NCBI
RefSeq Acc Id: XR_005315216
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2629,171,282 - 29,171,407 (-)NCBI
RefSeq Acc Id: XR_005345952
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12628,664,254 - 28,664,379 (-)NCBI
RefSeq Acc Id: XR_005379610
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02629,374,610 - 29,374,735 (-)NCBI
RefSeq Acc Id: XR_005413395
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02628,289,618 - 28,289,743 (-)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845027573 ENTREZGENE
Ensembl Transcript ENSCAFT00845048607 ENTREZGENE
NCBI Gene LOC119866289 ENTREZGENE