SEMG2 (semenogelin 2) - Rat Genome Database

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Gene: SEMG2 (semenogelin 2) Chlorocebus sabaeus
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Symbol: SEMG2
Name: semenogelin 2
RGD ID: 40894657
Description: ENCODES a protein that exhibits protease binding (ortholog); zinc ion binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); coagulation (ortholog); fertilization (ortholog); ASSOCIATED WITH adenosine deaminase deficiency (ortholog); focal epilepsy (ortholog); T-Cell Immunodeficiency, Recurrent Infections, and Autoimmunity with or without Cardiac Malformations (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: semenogelin-2
RGD Orthologs
Human
Bonobo
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366605067,243,594 - 67,246,751 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SEMG2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366605067,243,594 - 67,246,751 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
SEMG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382045,221,373 - 45,224,458 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2045,221,373 - 45,224,458 (+)EnsemblGRCh38hg38GRCh38
GRCh372043,850,014 - 43,853,099 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362043,283,424 - 43,286,513 (+)NCBINCBI36Build 36hg18NCBI36
Build 342043,283,423 - 43,286,513NCBI
Celera2040,558,613 - 40,561,702 (+)NCBICelera
Cytogenetic Map20q13.12NCBI
HuRef2040,591,869 - 40,594,958 (+)NCBIHuRef
CHM1_12043,752,561 - 43,755,650 (+)NCBICHM1_1
T2T-CHM13v2.02046,957,268 - 46,960,353 (+)NCBIT2T-CHM13v2.0
SEMG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22150,955,090 - 50,957,081 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12050,948,198 - 50,950,189 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02041,552,614 - 41,554,605 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12042,642,620 - 42,644,611 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2042,642,620 - 42,644,611 (+)Ensemblpanpan1.1panPan2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_037982735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_037982735   ⟹   XP_037838663
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605067,243,594 - 67,246,751 (-)NCBI
Protein Sequences
Protein RefSeqs XP_037838663 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_037838663   ⟸   XM_037982735


Additional Information

Database Acc Id Source(s)
NCBI Gene SEMG2 ENTREZGENE