MIR764 (microRNA 764) - Rat Genome Database

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Gene: MIR764 (microRNA 764) Homo sapiens
Analyze
Symbol: MIR764
Name: microRNA 764
RGD ID: 3497329
HGNC Page HGNC:37306
Description: Predicted to be involved in miRNA-mediated post-transcriptional gene silencing. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Predicted to be part of RISC complex.
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: hsa-mir-764
RGD Orthologs
Mouse
Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X114,639,435 - 114,639,519 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX114,639,435 - 114,639,519 (+)EnsemblGRCh38hg38GRCh38
GRCh37X113,873,918 - 113,874,002 (+)NCBIGRCh37GRCh37hg19GRCh37
CeleraX114,309,102 - 114,309,186 (+)NCBICelera
Cytogenetic MapXq23NCBI
HuRefX103,459,936 - 103,460,020 (+)NCBIHuRef
CHM1_1X113,784,854 - 113,784,938 (+)NCBICHM1_1
T2T-CHM13v2.0X113,047,947 - 113,048,031 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MIR764Humanautistic disorder  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311
MIR764Humanschizophrenia  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVarPMID:21681106 and PMID:30208311
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MIR764HumanChemical and Drug Induced Liver Injury  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:22363424
MIR764Humanliver cirrhosis  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:22363424


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MIR764Humanatrazine increases expressionISOMir764 (Rattus norvegicus)6480464Atrazine results in increased expression of MIR764 mRNACTDPMID:31185338
MIR764Humandecabromodiphenyl ether decreases expressionEXP 6480464decabromobiphenyl ether results in decreased expression of MIR764 mRNACTDPMID:34166751
MIR764Humanparacetamol decreases expressionISOMir764 (Rattus norvegicus)6480464Acetaminophen results in decreased expression of MIR764 mRNA alternative formCTDPMID:22363424
MIR764Humanperfluorooctane-1-sulfonic acid increases expressionISOMir764 (Rattus norvegicus)6480464perfluorooctane sulfonic acid results in increased expression of MIR764 mRNACTDPMID:24420840
MIR764Humansodium fluoride increases expressionISOMir764 (Mus musculus)6480464Sodium Fluoride results in increased expression of MIR764 mRNACTDPMID:29127033
MIR764Humantetrachloromethane increases expressionISOMir764 (Rattus norvegicus)6480464Carbon Tetrachloride results in increased expression of MIR764 mRNA alternative formCTDPMID:22363424


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MIR764Humancellular response to leukemia inhibitory factor acts_upstream_of_or_withinISOMir764 (Mus musculus)9068941 PMID:20439489MGIPMID:20439489
MIR764HumanmiRNA-mediated post-transcriptional gene silencing involved_inIEARfam:RF01920150520179 RNAcentralGO_REF:0000115

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MIR764HumanRISC complex part_ofIEARfam:RF01920150520179 RNAcentralGO_REF:0000115

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MIR764HumanAutism  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311
MIR764HumanSchizophrenia  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVarPMID:21681106 and PMID:30208311

#
Reference Title
Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:16381832   PMID:16954537   PMID:18215311   PMID:22407479   PMID:26119771   PMID:30318119  



MIR764
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X114,639,435 - 114,639,519 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX114,639,435 - 114,639,519 (+)EnsemblGRCh38hg38GRCh38
GRCh37X113,873,918 - 113,874,002 (+)NCBIGRCh37GRCh37hg19GRCh37
CeleraX114,309,102 - 114,309,186 (+)NCBICelera
Cytogenetic MapXq23NCBI
HuRefX103,459,936 - 103,460,020 (+)NCBIHuRef
CHM1_1X113,784,854 - 113,784,938 (+)NCBICHM1_1
T2T-CHM13v2.0X113,047,947 - 113,048,031 (+)NCBIT2T-CHM13v2.0
Mir764
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X145,785,255 - 145,785,362 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX145,785,255 - 145,785,362 (+)EnsemblGRCm39 Ensembl
GRCm38X147,002,259 - 147,002,366 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX147,002,259 - 147,002,366 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X143,436,802 - 143,436,909 (+)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX130,942,509 - 130,942,616 (+)NCBICelera
Cytogenetic MapXF2NCBI
cM MapX68.46NCBI
Mir764
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X115,490,638 - 115,490,745 (+)NCBIGRCr8
mRatBN7.2X110,678,597 - 110,678,704 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX110,678,597 - 110,678,704 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX112,778,324 - 112,778,431 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X116,277,182 - 116,277,289 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X113,830,289 - 113,830,396 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X118,123,251 - 118,123,358 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX118,123,251 - 118,123,358 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X118,264,668 - 118,264,775 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX109,996,475 - 109,996,582 (+)NCBICelera
Cytogenetic MapXq34NCBI

.

1 to 10 of 83 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 Xp22.33-q28(chrX:10701-155978689)x1 copy number loss See cases [RCV000133792] ChrX:10701..155978689 [GRCh38]
ChrX:60701..155208354 [GRCh37]
ChrX:701..154861548 [NCBI36]
ChrX:Xp22.33-q28		 pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x1 copy number loss See cases [RCV000050386] ChrX:10679..156013167 [GRCh38]
ChrX:60679..155242832 [GRCh37]
ChrX:679..154896026 [NCBI36]
ChrX:Xp22.33-q28		 pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x3 copy number gain See cases [RCV000050385] ChrX:10679..156013167 [GRCh38]
ChrX:60679..155242832 [GRCh37]
ChrX:679..154896026 [NCBI36]
ChrX:Xp22.33-q28		 pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:14245-155999293)x1 copy number loss See cases [RCV000052982] ChrX:14245..155999293 [GRCh38]
ChrX:64245..155228958 [GRCh37]
ChrX:4245..154882152 [NCBI36]
ChrX:Xp22.33-q28		 pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x1 copy number loss See cases [RCV000052986] ChrX:26102..155996431 [GRCh38]
ChrX:76102..155226096 [GRCh37]
ChrX:16102..154879290 [NCBI36]
ChrX:Xp22.33-q28		 pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x3 copy number gain See cases [RCV000052984] ChrX:26102..155996431 [GRCh38]
ChrX:76102..155226096 [GRCh37]
ChrX:16102..154879290 [NCBI36]
ChrX:Xp22.33-q28		 pathogenic
GRCh38/hg38 Xq21.1-28(chrX:85123740-156022206)x3 copy number gain See cases [RCV000133744] ChrX:85123740..156022206 [GRCh38]
ChrX:84378746..155251871 [GRCh37]
ChrX:84265402..154905065 [NCBI36]
ChrX:Xq21.1-28		 pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022826)x4 copy number gain See cases [RCV000133654] ChrX:10679..156022826 [GRCh38]
ChrX:60679..155252491 [GRCh37]
ChrX:679..154905685 [NCBI36]
ChrX:Xp22.33-q28		 pathogenic
GRCh38/hg38 Xp22.33-q28(chrX:20297-155999253)x3 copy number gain See cases [RCV000134564] ChrX:20297..155999253 [GRCh38]
ChrX:70297..155228918 [GRCh37]
ChrX:10297..154882112 [NCBI36]
ChrX:Xp22.33-q28		 pathogenic
GRCh38/hg38 Xq21.1-28(chrX:78605009-156016560)x1 copy number loss See cases [RCV000134570] ChrX:78605009..156016560 [GRCh38]
ChrX:77860506..155246225 [GRCh37]
ChrX:77747162..154899419 [NCBI36]
ChrX:Xq21.1-28		 pathogenic
1 to 10 of 83 rows

Predicted Targets
Summary Value
Count of predictions:26663
Count of gene targets:11716
Count of transcripts:22848
Interacting mature miRNAs:hsa-miR-764
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.




alimentary part of gastrointestinal system
circulatory system
ectoderm
hemolymphoid system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
1 1 14 1 10 4 2 5 2 4



Ensembl Acc Id: ENST00000390811
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX114,639,435 - 114,639,519 (+)Ensembl
RefSeq Acc Id: NR_031581
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38X114,639,435 - 114,639,519 (+)NCBI
GRCh37X113,873,918 - 113,874,002 (+)RGD
CeleraX114,309,102 - 114,309,186 (+)RGD
HuRefX103,459,936 - 103,460,020 (+)RGD
CHM1_1X113,784,854 - 113,784,938 (+)NCBI
T2T-CHM13v2.0X113,047,947 - 113,048,031 (+)NCBI
Sequence:


1 to 11 of 11 rows
Database
Acc Id
Source(s)
COSMIC MIR764 COSMIC
Ensembl Genes ENSG00000212100 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000390811 ENTREZGENE
GTEx ENSG00000212100 GTEx
HGNC ID HGNC:37306 ENTREZGENE
Human Proteome Map MIR764 Human Proteome Map
miRBase MI0003944 ENTREZGENE
NCBI Gene 100313838 ENTREZGENE
PharmGKB PA165757020 PharmGKB
RNAcentral URS0000759DF8 RNACentral
  URS000075B1C9 RNACentral
1 to 11 of 11 rows