GREP1 (glycine rich extracellular protein 1) - Rat Genome Database

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Gene: GREP1 (glycine rich extracellular protein 1) Pan paniscus
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Symbol: GREP1
Name: glycine rich extracellular protein 1
RGD ID: 329345983
Description: ASSOCIATED WITH Experimental Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); squamous cell carcinoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: glycine-rich extracellular protein 1
RGD Orthologs
Human
Mouse
Rat
Dog
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2183,533,003 - 3,547,865 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1167,311,389 - 7,326,251 (+)NCBINHGRI_mPanPan1


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
GREP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2183,533,003 - 3,547,865 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1167,311,389 - 7,326,251 (+)NCBINHGRI_mPanPan1
GREP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38162,988,262 - 3,002,011 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl162,988,256 - 3,002,016 (+)EnsemblGRCh38hg38GRCh38
GRCh37163,038,263 - 3,052,012 (+)NCBIGRCh37GRCh37hg19GRCh37
Celera163,244,505 - 3,249,960 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef163,010,969 - 3,016,424 (+)NCBIHuRef
CHM1_1163,039,036 - 3,044,491 (+)NCBICHM1_1
T2T-CHM13v2.0163,014,944 - 3,028,691 (+)NCBIT2T-CHM13v2.0
Grep1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391723,923,582 - 23,945,299 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1723,923,462 - 23,941,757 (-)EnsemblGRCm39 Ensembl
GRCm381723,704,608 - 23,726,451 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1723,704,488 - 23,722,783 (-)EnsemblGRCm38mm10GRCm38
MGSCv371723,841,455 - 23,858,907 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361723,432,110 - 23,450,405 (-)NCBIMGSCv36mm8
MGSCv361722,893,786 - 22,911,851 (-)NCBIMGSCv36mm8
Cytogenetic Map17A3.3NCBI
cM Map1712.01NCBI
Grep1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81013,231,755 - 13,253,200 (-)NCBIGRCr8
mRatBN7.21012,727,164 - 12,748,629 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1012,727,166 - 12,741,819 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01013,041,074 - 13,053,416 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01012,859,783 - 12,860,596 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41012,961,325 - 12,973,665 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11012,961,324 - 12,976,103 (-)NCBI
Celera1012,422,538 - 12,435,893 (-)NCBICelera
Cytogenetic Map10q12NCBI
LOC106558903
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,183,097 - 38,194,899 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha639,423,639 - 39,435,307 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0638,493,706 - 38,505,384 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1638,179,488 - 38,191,152 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,151,996 - 38,163,637 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0638,627,767 - 38,639,448 (-)NCBIUU_Cfam_GSD_1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_055100737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_055100737   ⟹   XP_054956712
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2183,533,003 - 3,547,865 (+)NCBI
NHGRI_mPanPan1167,311,389 - 7,326,251 (+)NCBI
Protein Sequences
Protein RefSeqs XP_054956712 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_054956712   ⟸   XM_055100737


Additional Information

Database Acc Id Source(s)
NCBI Gene GREP1 ENTREZGENE