DMRTC1 (DMRT like family C1) - Rat Genome Database

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Gene: DMRTC1 (DMRT like family C1) Pan paniscus
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Symbol: DMRTC1
Name: DMRT like family C1
RGD ID: 329331750
Description: ASSOCIATED WITH autistic disorder (ortholog); autosomal hemophilia A (ortholog); Cornelia de Lange syndrome 5 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: doublesex- and mab-3-related transcription factor C1
RGD Orthologs
Human
Mouse
Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X72,544,301 - 72,615,644 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X72,547,909 - 72,619,252 (-)NCBINHGRI_mPanPan1


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DMRTC1Bonoboautistic disorder  ISODMRTC1 (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311
DMRTC1Bonoboautosomal hemophilia A  ISODMRTC1 (Homo sapiens)8554872ClinVar Annotator: match by term: AUTOSOMAL HEMOPHILIA AClinVarPMID:31690835
DMRTC1BonoboCornelia de Lange syndrome 5  ISODMRTC1 (Homo sapiens)8554872ClinVar Annotator: match by term: Cornelia de Lange syndrome 5ClinVarPMID:24403048
DMRTC1Bonobofactor VIII deficiency  ISODMRTC1 (Homo sapiens)8554872ClinVar Annotator: match by term: Factor 8 deficiency and congenitalClinVarPMID:31690835
DMRTC1Bonobointestinal volvulus  ISODMRTC1 (Homo sapiens)8554872ClinVar Annotator: match by term: INTESTINAL MALROTATION and FAMILIALClinVarPMID:25741868
DMRTC1Bonobosyndromic X-linked intellectual disability Lubs type  ISODMRTC1 (Homo sapiens)8554872ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs typeClinVarPMID:25741868
DMRTC1BonoboVolvulus Of Midgut  ISODMRTC1 (Homo sapiens)8554872ClinVar Annotator: match by term: Volvulus of midgutClinVarPMID:25741868

PMID:30032202  



DMRTC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X72,544,301 - 72,615,644 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X72,547,909 - 72,619,252 (-)NCBINHGRI_mPanPan1
DMRTC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X72,872,025 - 72,943,837 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX72,872,025 - 72,943,837 (-)EnsemblGRCh38hg38GRCh38
GRCh37X72,091,859 - 72,163,676 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X72,008,584 - 72,012,347 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X71,874,883 - 71,880,719NCBI
CeleraX72,408,584 - 72,412,347 (+)NCBICelera
Cytogenetic MapXq13.1NCBI
HuRefX65,819,845 - 65,823,542 (+)NCBIHuRef
CHM1_1X71,984,326 - 71,988,139 (-)NCBICHM1_1
T2T-CHM13v2.0X71,305,532 - 71,377,347 (-)NCBIT2T-CHM13v2.0
Dmrtc1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X101,946,822 - 101,953,753 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX101,946,822 - 101,952,293 (-)EnsemblGRCm39 Ensembl
GRCm38X102,903,216 - 102,910,145 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX102,903,216 - 102,908,687 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X100,098,560 - 100,104,026 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X99,105,941 - 99,111,406 (-)NCBIMGSCv36mm8
CeleraX89,802,496 - 89,807,958 (-)NCBICelera
Cytogenetic MapXDNCBI
cM MapX45.79NCBI
Dmrtc1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X71,861,910 - 71,892,508 (+)NCBIGRCr8
mRatBN7.2X67,822,187 - 67,852,572 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX67,822,113 - 67,852,571 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX69,330,594 - 69,335,906 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X72,830,834 - 72,836,146 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X70,391,974 - 70,397,286 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X72,624,660 - 72,654,258 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
CeleraX69,159,060 - 69,198,968 (+)NCBICelera
Cytogenetic MapXq22NCBI

.






RefSeq Acc Id: XM_055106704   ⟹   XP_054962679
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X72,544,301 - 72,615,556 (-)NCBI
NHGRI_mPanPan1X72,547,909 - 72,619,126 (-)NCBI
RefSeq Acc Id: XM_057301163   ⟹   XP_057157146
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X72,544,301 - 72,615,644 (-)NCBI
NHGRI_mPanPan1X72,547,909 - 72,619,252 (-)NCBI
RefSeq Acc Id: XM_063601599   ⟹   XP_063457669
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X72,544,301 - 72,615,508 (-)NCBI
RefSeq Acc Id: XM_063601600   ⟹   XP_063457670
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X72,544,301 - 72,615,489 (-)NCBI
Protein RefSeqs XP_054962679 (Get FASTA)   NCBI Sequence Viewer  
  XP_057157146 (Get FASTA)   NCBI Sequence Viewer  
  XP_063457669 (Get FASTA)   NCBI Sequence Viewer  
  XP_063457670 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_054962679   ⟸   XM_055106704
- Peptide Label: isoform X1
RefSeq Acc Id: XP_057157146   ⟸   XM_057301163
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063457669   ⟸   XM_063601599
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063457670   ⟸   XM_063601600
- Peptide Label: isoform X1



Database
Acc Id
Source(s)
NCBI Gene DMRTC1 ENTREZGENE