LOC117976651 (small ribosomal subunit protein bS21m-like) - Rat Genome Database

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Gene: LOC117976651 (small ribosomal subunit protein bS21m-like) Pan paniscus
Analyze
Symbol: LOC117976651
Name: small ribosomal subunit protein bS21m-like
RGD ID: 32729099
Description: ENCODES a protein that exhibits structural constituent of ribosome (inferred); INVOLVED IN translation (inferred); FOUND IN ribonucleoprotein complex (inferred); ribosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 28S ribosomal protein S21, mitochondrial-like
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2152,012,225 - 52,014,781 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1151,981,400 - 51,983,963 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01172,955,968 - 172,959,600 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
translation  (IEA)

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034943170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_034943170   ⟹   XP_034799061
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2152,012,225 - 52,014,781 (-)NCBI
NHGRI_mPanPan1151,981,400 - 51,983,963 (-)NCBI
Mhudiblu_PPA_v01172,955,968 - 172,959,600 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034799061 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000002925.1
Reference Protein Sequences
RefSeq Acc Id: XP_034799061   ⟸   XM_034943170
- UniProtKB: A0A2R8ZCY9 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000012534 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000013695.1 UniProtKB/TrEMBL
InterPro Ribosomal_S21 UniProtKB/TrEMBL
NCBI Gene LOC117976651 ENTREZGENE
PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 UniProtKB/TrEMBL
  PTHR21109:SF10 UniProtKB/TrEMBL
Pfam Ribosomal_S21 UniProtKB/TrEMBL
UniProt A0A2R8ZCY9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-13 LOC117976651  small ribosomal subunit protein bS21m-like  LOC117976651  28S ribosomal protein S21, mitochondrial-like  Symbol and/or name change 5135510 APPROVED