VN1R67P (vomeronasal 1 receptor 67 pseudogene) - Rat Genome Database

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Gene: VN1R67P (vomeronasal 1 receptor 67 pseudogene) Homo sapiens
Analyze
Symbol: VN1R67P
Name: vomeronasal 1 receptor 67 pseudogene
RGD ID: 2859190
HGNC Page HGNC:37387
Description:
Type: pseudo (Ensembl: unitary_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: VN1R4  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381631,801,606 - 31,802,481 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1631,801,585 - 31,802,497 (-)EnsemblGRCh38hg38GRCh38
GRCh371631,812,927 - 31,813,802 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361631,720,428 - 31,721,249 (-)NCBINCBI36Build 36hg18NCBI36
Celera1628,495,016 - 28,495,891 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1629,373,305 - 29,374,180 (-)NCBIHuRef
CHM1_11633,131,549 - 33,132,424 (-)NCBICHM1_1
T2T-CHM13v2.01632,188,971 - 32,189,846 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:19952141  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:111
Count of miRNA genes:110
Interacting mature miRNAs:110
Transcripts:ENST00000568379
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 6 2 1 7 1 8 2 2
Below cutoff 566 702 330 94 263 47 1059 789 969 98 429 389 49 243 819

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000568379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,801,585 - 31,802,497 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC VN1R67P COSMIC
Ensembl Genes ENSG00000260722 Ensembl, ENTREZGENE
GTEx ENSG00000260722 GTEx
HGNC ID HGNC:37387 ENTREZGENE
Human Proteome Map VN1R67P Human Proteome Map
NCBI Gene 100131118 ENTREZGENE