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Gene: TUBAP11 (tubulin alpha pseudogene 11) Homo sapiens

Symbol:

TUBAP11

Name:

tubulin alpha pseudogene 11

RGD ID:

27374737

HGNC Page

Description:

Type:

pseudo (Ensembl: processed_pseudogene)

RefSeq Status:

Previously known as:

AC018868.2; tubulin, alpha 1b (TUBA1B) pseudogene

Related Functional Gene:

TUBA1B

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	34,848,983 - 34,850,484 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	34,849,137 - 34,850,395 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	35,141,184 - 35,142,685 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Cytogenetic Map	15	q14	NCBI
HuRef	15	11,986,807 - 11,988,308 (-)	NCBI		HuRef
CHM1_1	15	35,259,181 - 35,260,682 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	32,654,187 - 32,655,688 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

Model

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2289410	BW327_H	Body weight QTL 327 (human)	3.32	0.0001	Body fat amount		15	19980129	45980129	Human
1643273	BW330_H	Body Weight QTL 330 (human)	1.05	0.014	Body weight	body mass index	15	26866719	52866719	Human
2289430	BMD7_H	Bone mineral density QTL 7 (human)	3.32	0.0001	Bone mineral density		15	19980129	45980129	Human
1559411	SCL107_H	Serum cholesterol level QTL 107 (human)	3.88		Lipid level	triglyceride	15	26543552	52543552	Human
2299958	PRSTS330_H	Prostate tumor susceptibility QTL 330 (human)	1.02	0.0151	Prostate tumor susceptibility		15	34790230	60790230	Human
1643523	BW284_H	Body Weight QTL 284 (human)	1.95	0.0013	Body weight		15	21792889	47792889	Human
1559354	LDLPS4_H	Low density lipoprotein particle size QTL 4 (human)	2.2	0.019	LDL particle size		15	34790230	60790230	Human
2289420	BW314_H	Body weight QTL 314 (human)	2.72	0.0003	Body weight	lean mass	15	19980129	45980129	Human

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NG_028861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC018868	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068263	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000559655

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	15	34,849,137 - 34,850,395 (-)	Ensembl

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-06-07	TUBAP11	tubulin alpha pseudogene 11	TUBAP11	tubulin alpha pseudogene 11	Data merged from RGD:16562390	737654	PROVISIONAL
2020-04-20	TUBAP11	tubulin alpha pseudogene 11	AC018868.2	tubulin, alpha 1b (TUBA1B) pseudogene	Symbol and/or name change	19259463	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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