Mir376a (microRNA 376a) - Rat Genome Database

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Gene: Mir376a (microRNA 376a) Rattus norvegicus
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Symbol: Mir376a
Name: microRNA 376a
RGD ID: 2325367
Description: INTERACTS WITH 2,5-hexanedione; bis(2-ethylhexyl) phthalate; hexanal
Type: ncrna
RefSeq Status: PROVISIONAL
Previously known as: rno-mir-376a
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86134,559,371 - 134,559,452 (+)NCBIGRCr8
mRatBN7.26128,737,966 - 128,738,047 (+)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx6128,917,205 - 128,917,286 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06129,213,037 - 129,213,118 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06128,574,660 - 128,574,741 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06133,873,605 - 133,873,686 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06143,035,962 - 143,036,043 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera6126,322,345 - 126,322,426 (+)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mir376aRat2,5-hexanedione increases expressionEXP 64804642,5-hexanedione results in increased expression of MIR376A mRNACTDPMID:31760062
Mir376aRatbis(2-ethylhexyl) phthalate decreases expressionEXP 6480464Diethylhexyl Phthalate results in decreased expression of MIR376A mRNACTDPMID:28192093
Mir376aRathexanal decreases expressionEXP 6480464n-hexanal results in decreased expression of MIR376A mRNACTDPMID:26403475
Mir376aRatnitrofen increases expressionEXP 6480464nitrofen results in increased expression of MIR376A mRNACTDPMID:26720608

PMID:16274478   PMID:16381832   PMID:17604727   PMID:20403161   PMID:25279841   PMID:35217880  



.

Predicted Targets
Summary Value
Count of predictions:6486
Count of gene targets:4312
Count of transcripts:4558
Interacting mature miRNAs:rno-miR-376a-3p, rno-miR-376a-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 25 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)6122549046140994061Rat
2312560Pur20Proteinuria QTL 202.10.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)6125628133137801795Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat

1 to 10 of 25 rows





RefSeq Transcripts NR_032128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: NR_032128
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,371 - 134,559,452 (+)NCBI
mRatBN7.26128,737,966 - 128,738,047 (+)NCBI
Rnor_6.06133,873,605 - 133,873,686 (+)NCBI
Rnor_5.06143,035,962 - 143,036,043 (+)NCBI
Celera6126,322,345 - 126,322,426 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-35969 BioCyc
miRBase MI0003545 ENTREZGENE
NCBI Gene 100314256 ENTREZGENE
PhenoGen Mir376a PhenoGen
RNAcentral URS0000126D1F RNACentral
  URS000075ACF4 RNACentral
  URS000075BF4C RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-04-09 Mir376a  microRNA 376a  Mir376a  microRNA mir-376a  Name updated 61478 APPROVED
2010-06-02 Mir376a  microRNA mir-376a      Symbol and Name status set to provisional 70820 PROVISIONAL