Symbol:
Trav13-1l
Name:
T cell receptor alpha variable 13-1 like
RGD ID:
2322894
Description:
Orthologous to several human genes including TRAV13-1 (T cell receptor alpha variable 13-1); INTERACTS WITH benzo[a]pyrene (ortholog); N-Nitrosopyrrolidine (ortholog).
Type:
gene
RefSeq Status:
MODEL
Previously known as:
LOC100360051; rCG45358-like
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 15 28,181,203 - 28,181,905 (+) NCBI GRCr8 mRatBN7.2 15 25,707,729 - 25,708,431 (+) NCBI mRatBN7.2 mRatBN7.2 Rnor_6.0 15 31,709,631 - 31,710,335 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 15 35,524,044 - 35,524,815 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 15 29,494,499 - 29,495,201 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Cytogenetic Map 15 p14 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Trav13-1l Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 15 28,181,203 - 28,181,905 (+) NCBI GRCr8 mRatBN7.2 15 25,707,729 - 25,708,431 (+) NCBI mRatBN7.2 mRatBN7.2 Rnor_6.0 15 31,709,631 - 31,710,335 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 15 35,524,044 - 35,524,815 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 15 29,494,499 - 29,495,201 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Cytogenetic Map 15 p14 NCBI
TRAV13-2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 14 21,918,258 - 21,918,756 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 14 21,918,188 - 21,918,756 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 14 22,386,433 - 22,386,931 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 14 21,456,273 - 21,456,771 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 14 2,250,006 - 2,250,504 (+) NCBI Celera Cytogenetic Map 14 q11.2 NCBI HuRef 14 2,504,294 - 2,504,792 (+) NCBI HuRef CHM1_1 14 22,386,160 - 22,386,658 (+) NCBI CHM1_1 T2T-CHM13v2.0 14 16,115,891 - 16,116,389 (+) NCBI T2T-CHM13v2.0
.
1331729 Rf42 Renal function QTL 42 3.071 kidney blood vessel physiology trait (VT:0100012) absolute change in renal blood flow rate (CMO:0001168) 15 17362897 73690657 Rat 1641887 Alcrsp14 Alcohol response QTL 14 response to alcohol trait (VT:0010489) brain neurotensin receptor 1 density (CMO:0002068) 15 1 42356671 Rat 10755503 Bp391 Blood pressure QTL 391 2.37 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 15 20248600 37896129 Rat 1578646 Bmd18 Bone mineral density QTL 18 5.2 femur mineral mass (VT:0010011) trabecular volumetric bone mineral density (CMO:0001729) 15 22806240 98288169 Rat 9589149 Insul29 Insulin level QTL 29 9.06 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 15 1 34723002 Rat 1578647 Bmd17 Bone mineral density QTL 17 4 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 15 22806240 98288169 Rat 10401805 Kidm51 Kidney mass QTL 51 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 15 306329 45306329 Rat 2317750 Glom26 Glomerulus QTL 26 4.3 urine protein amount (VT:0005160) urine protein level (CMO:0000591) 15 12496141 65205939 Rat 2298549 Neuinf12 Neuroinflammation QTL 12 3.5 nervous system integrity trait (VT:0010566) spinal cord beta-2 microglobulin mRNA level (CMO:0002125) 15 1 55302115 Rat 8552920 Pigfal8 Plasma insulin-like growth factor 1 level QTL 8 3 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 15 1 34723002 Rat 2293688 Bss29 Bone structure and strength QTL 29 5.31 0.0001 femur morphology trait (VT:0000559) femur midshaft cortical cross-sectional area (CMO:0001663) 15 11111142 56111142 Rat 5685002 Bss103 Bone structure and strength QTL 103 2.8 tibia strength trait (VT:1000284) tibia total energy absorbed before break (CMO:0001736) 15 14481165 28469888 Rat 8694361 Abfw6 Abdominal fat weight QTL 6 10.2 0.001 visceral adipose mass (VT:0010063) abdominal fat pad weight to body weight ratio (CMO:0000095) 15 1 34723002 Rat 631273 Lecl2 Lens clarity QTL 2 0.001 lens clarity trait (VT:0001304) age of onset/diagnosis of cataract (CMO:0001584) 15 10596089 55596089 Rat 2300167 Bmd63 Bone mineral density QTL 63 5.9 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 15 11111142 56111142 Rat 731170 Pur3 Proteinuria QTL 3 2.3 0.0005 urine protein amount (VT:0005160) urine protein excretion rate (CMO:0000759) 15 1 41686771 Rat 738017 Hcas7 Hepatocarcinoma susceptibility QTL 7 2.91 liver integrity trait (VT:0010547) liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464) 15 2266368 46921453 Rat 10054130 Srcrt8 Stress Responsive Cort QTL 8 2.18 0.0085 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 15 22117933 67117933 Rat 2300173 Bmd62 Bone mineral density QTL 62 12.8 0.0001 lumbar vertebra mineral mass (VT:0010511) volumetric bone mineral density (CMO:0001553) 15 11111142 56111142 Rat 2324620 Coatc3 Coat color QTL 3 coat/hair pigmentation trait (VT:0010463) pigmented coat/hair area to total coat/hair area ratio (CMO:0001810) 15 19856566 46187442 Rat 61424 Scl1 Serum cholesterol level QTL 1 7.7 0.001 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 15 16725528 80672115 Rat 1582251 Gluco24 Glucose level QTL 24 3.2 0.0008 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 15 5530756 50530756 Rat 1354657 Despr13 Despair related QTL 13 0.0022 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 15 1 29912054 Rat 631550 Bw7 Body weight QTL 7 3.6 body mass (VT:0001259) body weight (CMO:0000012) 15 19856566 34924750 Rat 1578660 Bss19 Bone structure and strength QTL 19 4.3 femur morphology trait (VT:0000559) bone trabecular cross-sectional area (CMO:0002311) 15 22806240 98288169 Rat
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
RefSeq Acc Id:
XM_002728202
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source RGSC_v3.4 15 29,494,499 - 29,495,201 (+) RGD
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2023-09-19
Trav13-1l
T cell receptor alpha variable 13-1 like
LOC100360051
rCG45358-like
Symbol and Name Changed
1299863 APPROVED
2010-05-06
LOC100360051
rCG45358-like
Symbol and Name status set to provisional
70820 PROVISIONAL
