Ces2d-ps (carboxylesterase 2D, pseudogene) - Rat Genome Database

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Gene: Ces2d-ps (carboxylesterase 2D, pseudogene) Mus musculus
Analyze
No known orthologs.
Symbol: Ces2d-ps
Name: carboxylesterase 2D, pseudogene
RGD ID: 2295535
MGI Page MGI
Description: INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bis(2-ethylhexyl) phthalate; pregnenolone 16alpha-carbonitrile
Type: pseudo (Ensembl: transcribed_unprocessed_pseudogene)
RefSeq Status: VALIDATED
Previously known as: ENSMUSG00000031884; Gm9756
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Related Functional Gene: Ces2c  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398105,594,056 - 105,600,715 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8105,594,120 - 105,600,493 (+)EnsemblGRCm39 Ensembl
GRCm388104,867,424 - 104,874,083 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8104,867,488 - 104,873,861 (+)EnsemblGRCm38mm10GRCm38
MGSCv378107,391,324 - 107,397,983 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368107,756,553 - 107,763,212 (+)NCBIMGSCv36mm8
Cytogenetic Map8D3NCBI
cM Map853.04NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ces2d-psMouse2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of CES2D-PS mRNACTDPMID:26290441
Ces2d-psMousebis(2-ethylhexyl) phthalate multiple interactionsEXP 6480464[Streptozocin co-treated with Dietary Fats co-treated with Diethylhexyl Phthalate] results in increased expression of CES2D-PS mRNACTDPMID:33484791
Ces2d-psMousepregnenolone 16alpha-carbonitrile decreases expressionEXP 6480464Pregnenolone Carbonitrile results in decreased expression of CES2D-PS mRNACTDPMID:28903501
Ces2d-psMousestreptozocin multiple interactionsEXP 6480464[Streptozocin co-treated with Dietary Fats co-treated with Diethylhexyl Phthalate] results in increased expression of CES2D-PS mRNACTDPMID:33484791


#
Reference Title
Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:20931200  



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Variants in Ces2d-ps
244 total Variants

Predicted Target Of
Summary Value
Count of predictions:42
Count of miRNA genes:41
Interacting mature miRNAs:42
Transcripts:ENSMUST00000043209
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 34 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300560Tgl1_mtriglyceride level 1 (mouse)Not determined8102486208111650036Mouse
4141435Fbtq3_mfemoral bone trait QTL 3 (mouse)Not determined8100965309130127694Mouse
11252141Fdr2_mfat response to dietary restriction 2 (mouse)898390634130127694Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
1302105Im1_mImmunoregulatory 1 (mouse)Not determined899828531130127694Mouse
1301080Sluc9_msusceptibility to lung cancer 9 (mouse)Not determined899828531130127694Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined876411976110412125Mouse
1301766Desp1_mdespair 1 (mouse)Not determined885486208119486373Mouse
1301253Skmw2_mskeletal muscle weight 2 (mouse)Not determined886443553120443701Mouse

1 to 10 of 34 rows
22.MMHAP7FLH1.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388104,888,412 - 104,888,584UniSTSGRCm38
GRCm388104,869,038 - 104,869,210UniSTSGRCm38
MGSCv378107,412,312 - 107,412,484UniSTSGRCm37
MGSCv378107,392,938 - 107,393,110UniSTSGRCm37
Celera8109,111,010 - 109,111,182UniSTS
Cytogenetic Map8D3UniSTS
Whitehead_YAC1 UniSTS







Ensembl Acc Id: ENSMUST00000043209
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8105,594,120 - 105,600,493 (+)Ensembl
GRCm38.p6 Ensembl8104,867,488 - 104,873,861 (+)Ensembl
RefSeq Acc Id: NR_033726
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398105,594,056 - 105,600,715 (+)NCBI
GRCm388104,867,424 - 104,874,083 (+)ENTREZGENE
MGSCv378107,391,324 - 107,397,983 (+)RGD
cM Map8 ENTREZGENE
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000031884 Ensembl
  ENSMUSG00000141528 ENTREZGENE
Ensembl Transcript ENSMUST00000365736 ENTREZGENE
MGD MGI:3704319 ENTREZGENE
NCBI Gene 667754 ENTREZGENE
PhenoGen Ces2d-ps PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Ces2d-ps  carboxylesterase 2D, pseudogene  Gm9756  predicted gene 9756  Symbol and/or name change 5135510 APPROVED