UNC93B6 (unc-93 homolog B6 (pseudogene)) - Rat Genome Database

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Gene: UNC93B6 (unc-93 homolog B6 (pseudogene)) Homo sapiens
Analyze
Symbol: UNC93B6
Name: unc-93 homolog B6 (pseudogene)
RGD ID: 2292185
HGNC Page HGNC:34053
Description:
Type: pseudo (Ensembl: transcribed_processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: unc-93 homolog B6 pseudogene (C. elegans); unc-93 homolog B6, pseudogene
Related Functional Gene: UNC93B1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381171,603,260 - 71,608,044 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1171,603,261 - 71,607,592 (+)EnsemblGRCh38hg38GRCh38
GRCh371171,314,306 - 71,319,090 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361170,991,858 - 70,996,738 (+)NCBINCBI36Build 36hg18NCBI36
Celera1168,613,514 - 68,618,394 (+)NCBICelera
Cytogenetic Map11q13.4NCBI
HuRef1167,608,063 - 67,612,949 (+)NCBIHuRef
CHM1_11171,198,142 - 71,203,022 (+)NCBICHM1_1
T2T-CHM13v2.01171,530,163 - 71,534,953 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:830
Count of miRNA genes:576
Interacting mature miRNAs:645
Transcripts:ENST00000525262, ENST00000528242
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1
Low 11 3 19 30 59 145 6 37 26 1 1 3 1
Below cutoff 940 1103 893 183 825 100 1764 550 2625 163 708 920 89 522 1073 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000525262
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1171,603,260 - 71,608,040 (+)Ensembl
RefSeq Acc Id: ENST00000528242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1171,603,261 - 71,607,592 (+)Ensembl
RefSeq Acc Id: XM_173132
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
Build 361170,991,858 - 70,996,738 (+)NCBI Archive

Additional Information

Database Acc Id Source(s)
COSMIC UNC93B6 COSMIC
Ensembl Genes ENSG00000255562 Ensembl
  ENSG00000293238 ENTREZGENE
GTEx ENSG00000255562 GTEx
  ENSG00000293238 GTEx
HGNC ID HGNC:34053 ENTREZGENE
Human Proteome Map UNC93B6 Human Proteome Map
NCBI Gene 255620 ENTREZGENE
PharmGKB PA162408631 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-18 UNC93B6  unc-93 homolog B6 (pseudogene)  UNC93B6  unc-93 homolog B6, pseudogene  Symbol and/or name change 5135510 APPROVED
2017-08-08 UNC93B6  unc-93 homolog B6, pseudogene    unc-93 homolog B6 pseudogene (C. elegans)  Symbol and/or name change 5135510 APPROVED
2015-03-03 UNC93B6  unc-93 homolog B6 pseudogene (C. elegans)    unc-93 homolog B6 (C. elegans)  Symbol and/or name change 5135510 APPROVED