UNC93B4 (unc-93 homolog B4 (pseudogene)) - Rat Genome Database

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Gene: UNC93B4 (unc-93 homolog B4 (pseudogene)) Homo sapiens
Analyze
Symbol: UNC93B4
Name: unc-93 homolog B4 (pseudogene)
RGD ID: 2292102
HGNC Page HGNC:13484
Description: INTERACTS WITH temozolomide
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: unc-93 homolog B4 pseudogene (C. elegans); unc-93 homolog B4, pseudogene
Related Functional Gene: UNC93B1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3844,145,573 - 4,147,795 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl44,143,458 - 4,150,421 (-)EnsemblGRCh38hg38GRCh38
GRCh3744,147,300 - 4,149,522 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3644,195,639 - 4,198,737 (-)NCBINCBI36Build 36hg18NCBI36
Celera44,044,955 - 4,047,168 (-)NCBICelera
Cytogenetic Map4p16.3NCBI
HuRef44,083,476 - 4,085,689 (-)NCBIHuRef
CHM1_144,145,020 - 4,147,227 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
temozolomide  (EXP)

References
Additional References at PubMed
PMID:9847074   PMID:11867227  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:437
Count of miRNA genes:392
Interacting mature miRNAs:422
Transcripts:ENST00000505679
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1
Low 105 24 7 1 18 1 122 61 119 3 48 20 1 1 117 2
Below cutoff 1012 727 338 99 411 44 1081 613 634 62 414 340 56 249 665 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000505679
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl44,143,458 - 4,150,421 (-)Ensembl
RefSeq Acc Id: XR_016363
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
Build 3644,195,639 - 4,198,737 (-)NCBI Archive

Additional Information

Database Acc Id Source(s)
COSMIC UNC93B4 COSMIC
Ensembl Genes ENSG00000250381 Ensembl
GTEx ENSG00000250381 GTEx
HGNC ID HGNC:13484 ENTREZGENE
Human Proteome Map UNC93B4 Human Proteome Map
NCBI Gene 643384 ENTREZGENE
PharmGKB PA162408625 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-18 UNC93B4  unc-93 homolog B4 (pseudogene)  UNC93B4  unc-93 homolog B4, pseudogene  Symbol and/or name change 5135510 APPROVED
2017-08-08 UNC93B4  unc-93 homolog B4, pseudogene    unc-93 homolog B4 pseudogene (C. elegans)  Symbol and/or name change 5135510 APPROVED