Il22ra1 (interleukin 22 receptor subunit alpha 1) - Rat Genome Database

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Gene: Il22ra1 (interleukin 22 receptor subunit alpha 1) Heterocephalus glaber
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Symbol: Il22ra1
Name: interleukin 22 receptor subunit alpha 1
RGD ID: 18936475
Description: ENCODES a protein that exhibits interleukin-20 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH 3-hydroxy-3-methylglutaryl-CoA lyase deficiency (ortholog); Diamond-Blackfan anemia (ortholog); Rhinosinusitis (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Interleukin-22 receptor subunit alpha-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247648,601,587 - 8,618,120 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247648,601,765 - 8,618,161 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Il22ra1Naked Mole-RatRhinosinusitis susceptibilityISOIL22RA1 (Homo sapiens)9068941DNA:SNPs:5' utr more ...RGDPMID:19393422 and REF_RGD_ID:5147411
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Il22ra1Naked Mole-Rat3-hydroxy-3-methylglutaryl-CoA lyase deficiency  ISOIL22RA1 (Homo sapiens)8554872ClinVar Annotator: match by term: Deficiency of hydroxymethylglutaryl-CoA lyaseClinVarPMID:28492532
Il22ra1Naked Mole-RatDiamond-Blackfan anemia  ISOIL22RA1 (Homo sapiens)8554872ClinVar Annotator: match by term: Diamond-Blackfan anemiaClinVarPMID:19061985 more ...


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Il22ra1Naked Mole-Ratcytokine-mediated signaling pathway involved_inIEAPANTHER:PTN000466422150520179 TreeGrafterGO_REF:0000118
Il22ra1Naked Mole-Ratdefense response to Gram-negative bacterium acts_upstream_of_or_withinISOMGI:44317429068941 PMID:22801499MGIPMID:22801499
Il22ra1Naked Mole-Ratnegative regulation of inflammatory response involved_inISOIl22ra1 (Mus musculus)9068941 PMID:28811323UniProtPMID:28811323

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Il22ra1Naked Mole-Ratmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
Il22ra1Naked Mole-Ratplasma membrane located_inIEAPANTHER:PTN000466422150520179 TreeGrafterGO_REF:0000118

Molecular Function

  

PMID:21993625   PMID:22301074  



Il22ra1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247648,601,587 - 8,618,120 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247648,601,765 - 8,618,161 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
IL22RA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38124,119,771 - 24,143,140 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl124,119,771 - 24,143,140 (-)EnsemblGRCh38hg38GRCh38
GRCh37124,446,261 - 24,469,630 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36124,318,848 - 24,342,198 (-)NCBINCBI36Build 36hg18NCBI36
Build 34124,191,566 - 24,214,917NCBI
Celera122,775,750 - 22,799,094 (-)NCBICelera
Cytogenetic Map1p36.11NCBI
HuRef122,699,153 - 22,722,755 (-)NCBIHuRef
CHM1_1124,558,745 - 24,582,262 (-)NCBICHM1_1
T2T-CHM13v2.0123,957,480 - 23,980,846 (-)NCBIT2T-CHM13v2.0
Il22ra1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394135,455,470 - 135,482,694 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4135,455,483 - 135,479,451 (+)EnsemblGRCm39 Ensembl
GRCm384135,728,159 - 135,755,383 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4135,728,172 - 135,752,140 (+)EnsemblGRCm38mm10GRCm38
MGSCv374135,284,135 - 135,307,280 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364135,000,296 - 135,023,441 (+)NCBIMGSCv36mm8
Celera4133,921,320 - 133,944,459 (+)NCBICelera
Cytogenetic Map4D3NCBI
cM Map467.99NCBI
Il22ra1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85153,245,067 - 153,269,865 (+)NCBIGRCr8
mRatBN7.25147,961,496 - 147,986,296 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5147,961,349 - 147,986,296 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5150,664,403 - 150,689,544 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05152,434,996 - 152,460,039 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05152,420,684 - 152,445,823 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05154,078,093 - 154,102,903 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5154,077,944 - 154,106,433 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05157,843,037 - 157,867,847 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45154,502,235 - 154,527,108 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5146,370,675 - 146,395,370 (+)NCBICelera
Cytogenetic Map5q36NCBI
Il22ra1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554523,972,946 - 3,992,815 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554523,975,597 - 3,992,809 (-)NCBIChiLan1.0ChiLan1.0
IL22RA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21202,779,659 - 202,810,684 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11201,883,178 - 201,914,288 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0123,322,057 - 23,345,557 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1124,300,902 - 24,324,391 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl124,300,902 - 24,324,391 (-)Ensemblpanpan1.1panPan2
IL22RA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1275,454,087 - 75,475,211 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl275,454,164 - 75,474,218 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha272,026,027 - 72,047,135 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0276,014,524 - 76,035,621 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl276,014,607 - 76,034,628 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1272,836,903 - 72,857,987 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0273,844,179 - 73,865,281 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0274,849,235 - 74,870,319 (+)NCBIUU_Cfam_GSD_1.0
Il22ra1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505843,356,974 - 43,377,217 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364749,184,559 - 9,201,918 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364749,184,559 - 9,201,918 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL22RA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl681,867,848 - 81,884,996 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1681,867,849 - 81,885,017 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
IL22RA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120108,545,400 - 108,568,272 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20108,550,271 - 108,568,371 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660337,792,341 - 7,813,718 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

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Ensembl Acc Id: ENSHGLT00000018417   ⟹   ENSHGLP00000018236
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247648,601,587 - 8,618,120 (-)Ensembl
RefSeq Acc Id: XM_004850588   ⟹   XP_004850645
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247648,601,765 - 8,617,950 (-)NCBI
RefSeq Acc Id: XM_004850589   ⟹   XP_004850646
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247648,601,765 - 8,617,950 (-)NCBI
RefSeq Acc Id: XM_021263062   ⟹   XP_021118721
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247648,601,765 - 8,618,159 (-)NCBI
RefSeq Acc Id: XM_021263063   ⟹   XP_021118722
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247648,601,765 - 8,618,157 (-)NCBI
RefSeq Acc Id: XM_021263064   ⟹   XP_021118723
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247648,601,765 - 8,618,161 (-)NCBI
RefSeq Acc Id: XM_021263065   ⟹   XP_021118724
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247648,601,765 - 8,618,160 (-)NCBI
1 to 9 of 9 rows
Protein RefSeqs XP_004850645 (Get FASTA)   NCBI Sequence Viewer  
  XP_004850646 (Get FASTA)   NCBI Sequence Viewer  
  XP_021118721 (Get FASTA)   NCBI Sequence Viewer  
  XP_021118722 (Get FASTA)   NCBI Sequence Viewer  
  XP_021118723 (Get FASTA)   NCBI Sequence Viewer  
  XP_021118724 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB08886 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000018236
GenBank Protein JAO00365 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: XP_021118723   ⟸   XM_021263064
- Peptide Label: isoform X3
- UniProtKB: A0AAX6TF79 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021118724   ⟸   XM_021263065
- Peptide Label: isoform X4
- UniProtKB: A0AAX6TE14 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021118721   ⟸   XM_021263062
- Peptide Label: isoform X1
- UniProtKB: A0AAX6TC04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021118722   ⟸   XM_021263063
- Peptide Label: isoform X2
- UniProtKB: A0AAX6T8Q8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004850646   ⟸   XM_004850589
- Peptide Label: isoform X6
- UniProtKB: G5BHX5 (UniProtKB/TrEMBL)



1 to 18 of 18 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSHGLG00000013047 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000018417 ENTREZGENE
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Type-II_Cytokine-TF_Rcpt UniProtKB/TrEMBL
NCBI Gene Il22ra1 ENTREZGENE
PANTHER INTERFERON/INTERLEUKIN RECEPTOR UniProtKB/TrEMBL
  INTERLEUKIN-22 RECEPTOR SUBUNIT ALPHA-1 UniProtKB/TrEMBL
Pfam Tissue_fac UniProtKB/TrEMBL
Superfamily-SCOP SSF49265 UniProtKB/TrEMBL
UniProt A0AAX6PFR4 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6T8Q8 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6TC04 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6TE14 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6TF79 ENTREZGENE, UniProtKB/TrEMBL
  G5BHX5 ENTREZGENE, UniProtKB/TrEMBL
1 to 18 of 18 rows