Megf9 (multiple EGF like domains 9) - Rat Genome Database

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Gene: Megf9 (multiple EGF like domains 9) Heterocephalus glaber
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Symbol: Megf9
Name: multiple EGF like domains 9
RGD ID: 18932408
Description: INVOLVED IN animal organ morphogenesis (inferred); tissue development (inferred); FOUND IN basement membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Multiple epidermal growth factor-like domains 9; multiple epidermal growth factor-like domains protein 9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476014,629,985 - 14,723,546 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476014,629,989 - 14,721,655 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Megf9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476014,629,985 - 14,723,546 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476014,629,989 - 14,721,655 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MEGF9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389120,600,811 - 120,714,470 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9120,600,811 - 120,714,470 (-)EnsemblGRCh38hg38GRCh38
GRCh379123,363,089 - 123,476,748 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369122,402,912 - 122,516,433 (-)NCBINCBI36Build 36hg18NCBI36
Build 349120,442,644 - 120,501,329NCBI
Celera994,011,363 - 94,124,882 (-)NCBICelera
Cytogenetic Map9q33.2NCBI
HuRef992,980,942 - 93,106,705 (-)NCBIHuRef
CHM1_19123,510,375 - 123,623,915 (-)NCBICHM1_1
T2T-CHM13v2.09132,795,136 - 132,910,624 (-)NCBIT2T-CHM13v2.0
Megf9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39470,350,164 - 70,453,165 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl470,345,302 - 70,453,232 (-)EnsemblGRCm39 Ensembl
GRCm38470,431,927 - 70,534,928 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl470,427,065 - 70,534,995 (-)EnsemblGRCm38mm10GRCm38
MGSCv37470,092,961 - 70,195,962 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36469,918,288 - 70,021,289 (-)NCBIMGSCv36mm8
Celera469,026,247 - 69,125,899 (-)NCBICelera
Cytogenetic Map4C2NCBI
cM Map435.92NCBI
Megf9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8589,008,679 - 89,120,731 (-)NCBIGRCr8
mRatBN7.2583,993,565 - 84,105,622 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl583,993,565 - 84,105,622 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx586,384,336 - 86,496,433 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0588,201,662 - 88,313,760 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0588,177,337 - 88,289,435 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0586,586,996 - 86,696,388 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl586,586,996 - 86,696,388 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0590,674,194 - 90,783,779 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4587,771,841 - 87,884,885 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1587,835,304 - 87,889,914 (-)NCBI
Celera582,798,300 - 82,909,288 (-)NCBICelera
Cytogenetic Map5q31NCBI
Megf9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554197,303,346 - 7,395,493 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554197,303,248 - 7,399,796 (+)NCBIChiLan1.0ChiLan1.0
MEGF9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21118,631,309 - 18,745,186 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1918,633,656 - 18,747,648 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0991,728,219 - 91,842,056 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19120,076,181 - 120,189,364 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9120,076,181 - 120,189,364 (-)Ensemblpanpan1.1panPan2
MEGF9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11173,716,395 - 73,793,072 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1172,129,733 - 72,206,838 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01174,849,424 - 74,927,568 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11173,361,703 - 73,440,223 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01173,393,710 - 73,470,845 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01174,130,763 - 74,208,829 (-)NCBIUU_Cfam_GSD_1.0
Megf9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947189,327,446 - 189,428,986 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049364879,095,979 - 9,203,768 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEGF9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,661,420 - 260,756,866 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,662,355 - 260,756,930 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21292,733,710 - 292,827,868 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MEGF9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11218,866,228 - 18,976,522 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1218,866,185 - 18,974,909 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603524,028,779 - 24,146,286 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000020351   ⟹   ENSHGLP00000020150
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462476014,629,985 - 14,723,546 (+)Ensembl
RefSeq Acc Id: XM_004849471   ⟹   XP_004849528
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476014,629,989 - 14,721,655 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004849528 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB08708 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000020150
RefSeq Acc Id: XP_004849528   ⟸   XM_004849471
- UniProtKB: A0AAX6PE74 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000020150   ⟸   ENSHGLT00000020351


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000014426 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000020351 ENTREZGENE
NCBI Gene Megf9 ENTREZGENE
UniProt A0AAX6PE74 ENTREZGENE, UniProtKB/TrEMBL