Coq10b (coenzyme Q10B) - Rat Genome Database

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Gene: Coq10b (coenzyme Q10B) Heterocephalus glaber
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Symbol: Coq10b
Name: coenzyme Q10B
RGD ID: 18930628
Description: ENCODES a protein that exhibits ubiquinone binding (inferred); INVOLVED IN cellular respiration (inferred); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN mitochondrial inner membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: coenzyme Q-binding protein COQ10 homolog B, mitochondrial; coenzyme Q10 homolog B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248892,753,990 - 2,769,235 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Coq10bNaked Mole-RatNeurodevelopmental Disorders  ISORGD:16045958554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Coq10bNaked Mole-Ratcellular respiration involved_inIEAInterPro:IPR044996150520179 InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Coq10bNaked Mole-Ratmitochondrial inner membrane located_inIEAUniProtKB-KW:KW-0999150520179 UniProtGO_REF:0000043
Coq10bNaked Mole-Ratmitochondrial inner membrane located_inIEAUniProtKB-SubCell:SL-0168150520179 UniProtGO_REF:0000044
Coq10bNaked Mole-Ratmitochondrion located_inIEAUniProtKB-KW:KW-0496150520179 UniProtGO_REF:0000043
Coq10bNaked Mole-Ratmitochondrion located_inIEAPANTHER:PTN000307468150520179 TreeGrafterGO_REF:0000118

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Coq10bNaked Mole-Ratubiquinone binding enablesIEAInterPro:IPR044996150520179 InterProGO_REF:0000002

PMID:22301074   PMID:30032202  



Coq10b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248892,753,990 - 2,769,235 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
COQ10B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382197,453,552 - 197,475,310 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2197,453,493 - 197,475,310 (+)EnsemblGRCh38hg38GRCh38
GRCh372198,318,276 - 198,340,034 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362198,026,476 - 198,048,096 (+)NCBINCBI36Build 36hg18NCBI36
Celera2192,074,111 - 192,095,724 (+)NCBICelera
Cytogenetic Map2q33.1NCBI
HuRef2190,170,684 - 190,192,464 (+)NCBIHuRef
CHM1_12198,324,072 - 198,345,690 (+)NCBICHM1_1
T2T-CHM13v2.02197,937,200 - 197,958,936 (+)NCBIT2T-CHM13v2.0
Coq10b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39155,091,929 - 55,111,861 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl155,091,929 - 55,111,861 (+)EnsemblGRCm39 Ensembl
GRCm38155,052,770 - 55,072,702 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl155,052,770 - 55,072,702 (+)EnsemblGRCm38mm10GRCm38
MGSCv37155,109,614 - 55,129,546 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36154,997,315 - 55,016,498 (+)NCBIMGSCv36mm8
Celera155,572,843 - 55,592,772 (+)NCBICelera
Cytogenetic Map1C1.2NCBI
cM Map128.0NCBI
Coq10b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8964,048,168 - 64,068,082 (+)NCBIGRCr8
mRatBN7.2956,553,751 - 56,573,671 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl956,553,758 - 56,573,663 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx965,063,617 - 65,082,593 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0970,179,514 - 70,198,490 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0968,479,090 - 68,498,222 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0961,655,963 - 61,675,880 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl961,655,963 - 61,675,873 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0961,337,179 - 61,357,092 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4953,858,750 - 53,878,664 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1953,860,163 - 53,880,077 (+)NCBI
Celera954,036,101 - 54,055,146 (+)NCBICelera
Cytogenetic Map9q31NCBI
Coq10b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554033,080,945 - 3,090,982 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554033,080,945 - 3,090,978 (-)NCBIChiLan1.0ChiLan1.0
COQ10B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213100,065,332 - 100,088,862 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B100,080,324 - 100,103,854 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B84,696,607 - 84,718,187 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B202,591,244 - 202,612,215 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B202,591,240 - 202,612,215 (+)Ensemblpanpan1.1panPan2
COQ10B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1376,984,886 - 7,005,572 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl376,984,935 - 7,005,406 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha377,931,067 - 7,951,766 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0376,875,413 - 6,896,131 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl376,808,860 - 6,914,722 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1376,874,210 - 6,894,913 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0376,841,018 - 6,861,879 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0376,864,326 - 6,885,030 (+)NCBIUU_Cfam_GSD_1.0
Coq10b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303155,118,998 - 155,143,556 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365061,694,380 - 1,719,414 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365061,694,516 - 1,718,994 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COQ10B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15101,338,141 - 101,354,948 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115101,338,012 - 101,354,714 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215112,512,217 - 112,528,766 (+)NCBISscrofa10.2Sscrofa10.2susScr3
COQ10B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11082,966,422 - 82,989,000 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1082,966,377 - 82,989,184 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040116,455,152 - 116,477,537 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

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RefSeq Transcripts XM_021249784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01099738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_021249784   ⟹   XP_021105443
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248892,753,990 - 2,769,235 (-)NCBI
Protein RefSeqs XP_021105443 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000011104
RefSeq Acc Id: XP_021105443   ⟸   XM_021249784
- UniProtKB: A0AAX6SAE7 (UniProtKB/TrEMBL)



1 to 12 of 12 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSHGLG00000007969 ENTREZGENE
Ensembl Transcript ENSHGLT00000011228 ENTREZGENE
Gene3D-CATH 3.30.530.20 UniProtKB/TrEMBL
InterPro COQ10-like UniProtKB/TrEMBL
  COQ10_START UniProtKB/TrEMBL
  START-like_dom_sf UniProtKB/TrEMBL
NCBI Gene Coq10b ENTREZGENE
PANTHER COENZYME Q-BINDING PROTEIN COQ10 HOMOLOG B, MITOCHONDRIAL UniProtKB/TrEMBL
  SPERM PROTEIN HOMOLOG UniProtKB/TrEMBL
Pfam Polyketide_cyc UniProtKB/TrEMBL
Superfamily-SCOP Bet v1-like UniProtKB/TrEMBL
UniProt A0AAX6SAE7 ENTREZGENE, UniProtKB/TrEMBL
1 to 12 of 12 rows