Advanced Search (OLGA)

Gene: COQ10B (coenzyme Q10B) Canis lupus familiaris

Analyze

Symbol:

COQ10B

Name:

coenzyme Q10B

RGD ID:

12229545

Description:

ENCODES a protein that exhibits ATP binding (inferred); protein folding chaperone (inferred); ubiquinone binding (inferred); INVOLVED IN cellular respiration (inferred); protein folding (inferred); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN mitochondrial inner membrane (inferred); mitochondrion (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

coenzyme Q-binding protein COQ10 homolog B, mitochondrial; coenzyme Q10 homolog B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	COQ10B (coenzyme Q10B)	HGNC	EggNOG, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Coq10b (coenzyme Q10B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Coq10b (coenzyme Q10B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Coq10b (coenzyme Q10B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	COQ10B (coenzyme Q10B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Coq10b (coenzyme Q10B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	COQ10B (coenzyme Q10B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	COQ10B (coenzyme Q10B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Coq10b (coenzyme Q10B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	HSPE1 (heat shock protein family E (Hsp10) member 1)	HGNC	OMA, Panther

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	6,984,886 - 7,005,572 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	6,984,935 - 7,005,406 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	7,931,067 - 7,951,766 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	6,875,413 - 6,896,131 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	6,808,860 - 6,914,722 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	6,874,210 - 6,894,913 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	6,841,018 - 6,861,879 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	6,864,326 - 6,885,030 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular respiration (IEA)

protein folding (IEA)

Cellular Component

mitochondrial inner membrane (IEA)

mitochondrion (IBA,IEA)

Molecular Function

ATP binding (IEA)

protein folding chaperone (IEA)

ubiquinone binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

COQ10B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	6,984,886 - 7,005,572 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	6,984,935 - 7,005,406 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	7,931,067 - 7,951,766 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	6,875,413 - 6,896,131 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	6,808,860 - 6,914,722 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	6,874,210 - 6,894,913 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	6,841,018 - 6,861,879 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	6,864,326 - 6,885,030 (+)	NCBI		UU_Cfam_GSD_1.0

COQ10B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	197,453,552 - 197,475,310 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	197,453,493 - 197,475,310 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	198,318,276 - 198,340,034 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	198,026,476 - 198,048,096 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	192,074,111 - 192,095,724 (+)	NCBI		Celera
Cytogenetic Map	2	q33.1	NCBI
HuRef	2	190,170,684 - 190,192,464 (+)	NCBI		HuRef
CHM1_1	2	198,324,072 - 198,345,690 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	197,937,200 - 197,958,936 (+)	NCBI		T2T-CHM13v2.0

Coq10b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	55,091,929 - 55,111,861 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	55,091,929 - 55,111,861 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	55,052,770 - 55,072,702 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	55,052,770 - 55,072,702 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	55,109,614 - 55,129,546 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	54,997,315 - 55,016,498 (+)	NCBI		MGSCv36	mm8
Celera	1	55,572,843 - 55,592,772 (+)	NCBI		Celera
Cytogenetic Map	1	C1.2	NCBI
cM Map	1	28.0	NCBI

Coq10b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	64,048,168 - 64,068,082 (+)	NCBI		GRCr8
mRatBN7.2	9	56,553,751 - 56,573,671 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	56,553,758 - 56,573,663 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	65,063,617 - 65,082,593 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	70,179,514 - 70,198,490 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	68,479,090 - 68,498,222 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	61,655,963 - 61,675,880 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	61,655,963 - 61,675,873 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	61,337,179 - 61,357,092 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	53,858,750 - 53,878,664 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	53,860,163 - 53,880,077 (+)	NCBI
Celera	9	54,036,101 - 54,055,146 (+)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

Coq10b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	3,080,945 - 3,090,982 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	3,080,945 - 3,090,978 (-)	NCBI	ChiLan1.0	ChiLan1.0

COQ10B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	100,065,332 - 100,088,862 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	100,080,324 - 100,103,854 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	84,696,607 - 84,718,187 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	202,591,244 - 202,612,215 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	202,591,240 - 202,612,215 (+)	Ensembl	panpan1.1		panPan2

Coq10b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	155,118,998 - 155,143,556 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936506	1,694,380 - 1,719,414 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936506	1,694,516 - 1,718,994 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

COQ10B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	101,338,141 - 101,354,948 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	101,338,012 - 101,354,714 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	112,512,217 - 112,528,766 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

COQ10B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	82,966,422 - 82,989,000 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	82,966,377 - 82,989,184 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	116,455,152 - 116,477,537 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Coq10b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624889	2,753,990 - 2,769,235 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in COQ10B
330 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022415108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038447489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038447490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038447491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038463810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038521552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038521553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038521554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038585248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038585249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038585250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038649654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038649655	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038649656	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_536015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000049625 ⟹ ENSCAFP00000036353

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	37	6,984,943 - 7,004,755 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000080497 ⟹ ENSCAFP00000043824

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	37	6,984,951 - 7,005,178 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000088449 ⟹ ENSCAFP00000056011

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	37	6,984,935 - 7,005,406 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845046446 ⟹ ENSCAFP00845036464

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	37	6,808,860 - 6,914,419 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845046509 ⟹ ENSCAFP00845036512

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	37	6,808,860 - 6,914,300 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845046585 ⟹ ENSCAFP00845036573

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	37	6,875,401 - 6,912,908 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845046659 ⟹ ENSCAFP00845036623

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	37	6,875,401 - 6,896,125 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845046702 ⟹ ENSCAFP00845036652

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	37	6,875,492 - 6,896,125 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845046746 ⟹ ENSCAFP00845036678

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	37	6,912,300 - 6,914,722 (+)	Ensembl

RefSeq Acc Id:

XM_022415108 ⟹ XP_022270816

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	37	6,985,108 - 7,005,572 (+)	NCBI
Dog10K_Boxer_Tasha	37	7,931,314 - 7,951,766 (+)	NCBI

Sequence:

show sequence

AGGGGCGGAGCGGCCCGGCCCGGCCGGATGCCTTTCCGCGTCTCTGAAGGGAGAAGGTCCCCGG
CGATGGGCGTGGGGGGGCCGCGGCGACAGATATTTAGCTTCCTGTGGTATATTGATGACCAGAA
CTCTTCCACTACATACCTCAATTTTGCCTAAGGAGATATATGCAAGAACTTTCTTCAAAATCGC
TGCACCATTAATAAACAAAAGAAAAGAATATTCAGAAAGGAGAATTATAGGATATTCTATGCAG
GAAATGTATGATGTGGTATCAGGAATGGAGGATTACAAACATTTTGTTCCTTGGTGCAAAAAAT
CAGATGTAATATCAAAGAGAACCGGATACTGCAAAACACGATTAGAAATTGGGTTTCCACCTGT
TTTGGAGCGCTATACATCAGTAGTAACCTTGGTGAAACCACATTTGGTAAAGGCATCCTGTACG
GATGGGAAGCTTTTCAATCATTTGGAGACTGTTTGGCGTTTTAGTCCTGGTCTTCCTGGCTACC
CAAGAACTTGTACCTTGGATTTTTCAATTTCTTTCGAATTTCGCTCCCTTCTACACTCTCAGCT
TGCCACACTGTTTTTCGATGAAGTTGTAAAGCAGATGGTAGCTGCCTTTGAAAGAAGAGCATGT
AAGCTGTATGGTCCAGAAACAAATATACCTCGGGAATTAATGCTTCATGAAGTTCATCACACGT
AAAAGGAAAAAGAACTGGTCACCTACTTGTAACTTTAGTGTATTCACTTTTAGGAAGTGCTTTC
ATTTGCTTTCAGAAGTCAGAGAGCATTTGTTAAACACAGCTTTGATTATAAACCTGCACCGTTG
AGAATTTGCACTTGGAATATGGAACCACATGTATATAGAATTTAATCAAGTGTAATTCAAAGTA
ATGTATATATTAGCATATTTACAATAATGGGATGTCATTCCTATTGCTAGAATATGGACATCAC
TCTTAGCAGAAATTGAAACTAAATTTAAACCCTTTAATTATCACCTTATTTGAAAGAGTTTAGT
TGAGATGTTCACATAGTATGTATTATATTAACCGTATCACCTTTAAGTTATTAAATTCAGACTA
TTTATAACTTATTGTCATAGGACTTGCCTCTTGGTTTAGGATATTTGAGTAATCATCAGATATT
TAAAGTAAACTTTGACTTAAAAATACTGTTAATGAAGGTTCCCTGGCACTTTCTTATTTTTAAA
TTGTTCTTAATGGGTAATAGGTAATTCAGTACCATGTGTAGTGACATTAACTCCTAGATAAACA
GTGAATATTTTTTTTGGTGAGTGGTCCAGAGCTTTAAGCTACTTACTTCTCTTGTAGTTTGCAG
CCCTCTTCCAGATACTCTGACTACTCTTTCGGTAATGCTAATTGTATGTCAAATTTTGACTACA
GCAGTGGGCGACGGATGAAGATAAGTTGGTCGATAGGTCTCTAGCACCATACATCCCAATTTTC
TATTTATTGTGTGTACTCACTTTCAGTAATGTATTTCAAACTGATATTTTTGTAAACAAATCAA
TGTCTAAAGGACTGAAGTGGTAACTTAATAAAGTAAATTTGTTTATTTTTTGTACA

hide sequence

RefSeq Acc Id:

XM_038447489 ⟹ XP_038303417

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	37	6,875,421 - 6,896,131 (+)	NCBI

RefSeq Acc Id:

XM_038447490 ⟹ XP_038303418

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	37	6,875,660 - 6,896,131 (+)	NCBI

RefSeq Acc Id:

XM_038447491 ⟹ XP_038303419

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	37	6,875,413 - 6,896,131 (+)	NCBI

RefSeq Acc Id:

XM_038463810 ⟹ XP_038319738

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	37	7,931,067 - 7,951,766 (+)	NCBI

RefSeq Acc Id:

XM_038521552 ⟹ XP_038377480

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	37	6,874,218 - 6,894,913 (+)	NCBI

RefSeq Acc Id:

XM_038521553 ⟹ XP_038377481

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	37	6,874,457 - 6,894,913 (+)	NCBI

RefSeq Acc Id:

XM_038521554 ⟹ XP_038377482

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	37	6,874,210 - 6,894,913 (+)	NCBI

RefSeq Acc Id:

XM_038585248 ⟹ XP_038441176

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	37	6,864,334 - 6,885,030 (+)	NCBI

RefSeq Acc Id:

XM_038585249 ⟹ XP_038441177

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	37	6,864,573 - 6,885,030 (+)	NCBI

RefSeq Acc Id:

XM_038585250 ⟹ XP_038441178

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	37	6,864,326 - 6,885,030 (+)	NCBI

RefSeq Acc Id:

XM_038649654 ⟹ XP_038505582

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	37	6,841,026 - 6,861,879 (+)	NCBI

RefSeq Acc Id:

XM_038649655 ⟹ XP_038505583

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	37	6,841,265 - 6,861,879 (+)	NCBI

RefSeq Acc Id:

XM_038649656 ⟹ XP_038505584

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	37	6,841,018 - 6,861,879 (+)	NCBI

RefSeq Acc Id:

XM_536015 ⟹ XP_536015

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	37	6,984,886 - 7,005,572 (+)	NCBI
Dog10K_Boxer_Tasha	37	7,931,075 - 7,951,766 (+)	NCBI

Sequence:

show sequence

TCGGCGGGGAGGGCGGCGCCGTCCGCCTGGTCCCGGAGGCGGCCGCCGGCTTCGGCGAAACGAT
CATGGCAGCTCGGTCCGGTCAGAGGGCGCTAAGAAAGCTAGTTTCGGGATGCCGCCCGACGGCA
GCGGCAGCGGCCGGAACCCCGGCTCCGGCGCAGGGGCCTGCGCGGCACGTCAGATATTTAGCTT
CCTGTGGTATATTGATGACCAGAACTCTTCCACTACATACCTCAATTTTGCCTAAGGAGATATA
TGCAAGAACTTTCTTCAAAATCGCTGCACCATTAATAAACAAAAGAAAAGAATATTCAGAAAGG
AGAATTATAGGATATTCTATGCAGGAAATGTATGATGTGGTATCAGGAATGGAGGATTACAAAC
ATTTTGTTCCTTGGTGCAAAAAATCAGATGTAATATCAAAGAGAACCGGATACTGCAAAACACG
ATTAGAAATTGGGTTTCCACCTGTTTTGGAGCGCTATACATCAGTAGTAACCTTGGTGAAACCA
CATTTGGTAAAGGCATCCTGTACGGATGGGAAGCTTTTCAATCATTTGGAGACTGTTTGGCGTT
TTAGTCCTGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATTTTTCAATTTCTTTCGAATT
TCGCTCCCTTCTACACTCTCAGCTTGCCACACTGTTTTTCGATGAAGTTGTAAAGCAGATGGTA
GCTGCCTTTGAAAGAAGAGCATGTAAGCTGTATGGTCCAGAAACAAATATACCTCGGGAATTAA
TGCTTCATGAAGTTCATCACACGTAAAAGGAAAAAGAACTGGTCACCTACTTGTAACTTTAGTG
TATTCACTTTTAGGAAGTGCTTTCATTTGCTTTCAGAAGTCAGAGAGCATTTGTTAAACACAGC
TTTGATTATAAACCTGCACCGTTGAGAATTTGCACTTGGAATATGGAACCACATGTATATAGAA
TTTAATCAAGTGTAATTCAAAGTAATGTATATATTAGCATATTTACAATAATGGGATGTCATTC
CTATTGCTAGAATATGGACATCACTCTTAGCAGAAATTGAAACTAAATTTAAACCCTTTAATTA
TCACCTTATTTGAAAGAGTTTAGTTGAGATGTTCACATAGTATGTATTATATTAACCGTATCAC
CTTTAAGTTATTAAATTCAGACTATTTATAACTTATTGTCATAGGACTTGCCTCTTGGTTTAGG
ATATTTGAGTAATCATCAGATATTTAAAGTAAACTTTGACTTAAAAATACTGTTAATGAAGGTT
CCCTGGCACTTTCTTATTTTTAAATTGTTCTTAATGGGTAATAGGTAATTCAGTACCATGTGTA
GTGACATTAACTCCTAGATAAACAGTGAATATTTTTTTTGGTGAGTGGTCCAGAGCTTTAAGCT
ACTTACTTCTCTTGTAGTTTGCAGCCCTCTTCCAGATACTCTGACTACTCTTTCGGTAATGCTA
ATTGTATGTCAAATTTTGACTACAGCAGTGGGCGACGGATGAAGATAAGTTGGTCGATAGGTCT
CTAGCACCATACATCCCAATTTTCTATTTATTGTGTGTACTCACTTTCAGTAATGTATTTCAAA
CTGATATTTTTGTAAACAAATCAATGTCTAAAGGACTGAAGTGGTAACTTAATAAAGTAAATTT
GTTTATTTTTTGTACA

hide sequence

Protein Sequences


Protein RefSeqs	XP_022270816	(Get FASTA)	NCBI Sequence Viewer
	XP_038303417	(Get FASTA)	NCBI Sequence Viewer
	XP_038303418	(Get FASTA)	NCBI Sequence Viewer
	XP_038303419	(Get FASTA)	NCBI Sequence Viewer
	XP_038319738	(Get FASTA)	NCBI Sequence Viewer
	XP_038377480	(Get FASTA)	NCBI Sequence Viewer
	XP_038377481	(Get FASTA)	NCBI Sequence Viewer
	XP_038377482	(Get FASTA)	NCBI Sequence Viewer
	XP_038441176	(Get FASTA)	NCBI Sequence Viewer
	XP_038441177	(Get FASTA)	NCBI Sequence Viewer
	XP_038441178	(Get FASTA)	NCBI Sequence Viewer
	XP_038505582	(Get FASTA)	NCBI Sequence Viewer
	XP_038505583	(Get FASTA)	NCBI Sequence Viewer
	XP_038505584	(Get FASTA)	NCBI Sequence Viewer
	XP_536015	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000043824.1
	ENSCAFP00000056011.2
	ENSCAFP00030014674.1
	ENSCAFP00030014707.1
	ENSCAFP00040034789.1
	ENSCAFP00040034824.1
	ENSCAFP00845036512.1
	ENSCAFP00845036573.1
	ENSCAFP00845036623
	ENSCAFP00845036623.1
	ENSCAFP00845036652
	ENSCAFP00845036652.1
	ENSCAFP00845036678.1

RefSeq Acc Id:	XP_536015 ⟸ XM_536015
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MXW0 (UniProtKB/TrEMBL), A0A8C0JWA3 (UniProtKB/TrEMBL), A0A8I3Q9W0 (UniProtKB/TrEMBL), A0A8I3PXZ7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAARSGQRALRKLVSGCRPTAAAAAGTPAPAQGPARHVRYLASCGILMTRTLPLHTSILPKEIY ARTFFKIAAPLINKRKEYSERRIIGYSMQEMYDVVSGMEDYKHFVPWCKKSDVISKRTGYCKTR LEIGFPPVLERYTSVVTLVKPHLVKASCTDGKLFNHLETVWRFSPGLPGYPRTCTLDFSISFEF RSLLHSQLATLFFDEVVKQMVAAFERRACKLYGPETNIPRELMLHEVHHT hide sequence

RefSeq Acc Id:	XP_022270816 ⟸ XM_022415108
- Peptide Label:	isoform X2
- Sequence:	show sequence MTRTLPLHTSILPKEIYARTFFKIAAPLINKRKEYSERRIIGYSMQEMYDVVSGMEDYKHFVPW CKKSDVISKRTGYCKTRLEIGFPPVLERYTSVVTLVKPHLVKASCTDGKLFNHLETVWRFSPGL PGYPRTCTLDFSISFEFRSLLHSQLATLFFDEVVKQMVAAFERRACKLYGPETNIPRELMLHEV HHT hide sequence

Ensembl Acc Id:

ENSCAFP00000056011 ⟸ ENSCAFT00000088449

Ensembl Acc Id:

ENSCAFP00000036353 ⟸ ENSCAFT00000049625

Ensembl Acc Id:

ENSCAFP00000043824 ⟸ ENSCAFT00000080497

RefSeq Acc Id:	XP_038377482 ⟸ XM_038521554
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038377480 ⟸ XM_038521552
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038377481 ⟸ XM_038521553
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038505584 ⟸ XM_038649656
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038505582 ⟸ XM_038649654
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038505583 ⟸ XM_038649655
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038303419 ⟸ XM_038447491
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0Z3Y6 (UniProtKB/TrEMBL), A0A8I3PPK0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038303417 ⟸ XM_038447489
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MXW0 (UniProtKB/TrEMBL), A0A8C0JWA3 (UniProtKB/TrEMBL), A0A8I3Q9W0 (UniProtKB/TrEMBL), A0A8I3PXZ7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038303418 ⟸ XM_038447490
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038319738 ⟸ XM_038463810
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0Z3Y6 (UniProtKB/TrEMBL), A0A8I3PPK0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038441178 ⟸ XM_038585250
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0Z3Y6 (UniProtKB/TrEMBL), A0A8I3PPK0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038441176 ⟸ XM_038585248
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JWA3 (UniProtKB/TrEMBL), A0A8C0MXW0 (UniProtKB/TrEMBL), A0A8I3PXZ7 (UniProtKB/TrEMBL), A0A8I3Q9W0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038441177 ⟸ XM_038585249
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSCAFP00845036652 ⟸ ENSCAFT00845046702

Ensembl Acc Id:

ENSCAFP00845036512 ⟸ ENSCAFT00845046509

Ensembl Acc Id:

ENSCAFP00845036623 ⟸ ENSCAFT00845046659

Ensembl Acc Id:

ENSCAFP00845036678 ⟸ ENSCAFT00845046746

Ensembl Acc Id:

ENSCAFP00845036464 ⟸ ENSCAFT00845046446

Ensembl Acc Id:

ENSCAFP00845036573 ⟸ ENSCAFT00845046585

Protein Domains

Coenzyme Q-binding protein COQ10 START

Promoters

RGD ID:

13689110

Promoter ID:

EPDNEW_C7176

Type:

initiation region

Name:

COQ10B_1

Description:

coenzyme Q10B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_C7178

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	37	6,984,942 - 6,985,002	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000043512	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030009079	UniProtKB/TrEMBL
	ENSCAFG00040021466	UniProtKB/TrEMBL
	ENSCAFG00845026337	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000080497.2	UniProtKB/TrEMBL
	ENSCAFT00000088449.2	UniProtKB/TrEMBL
	ENSCAFT00030016786.1	UniProtKB/TrEMBL
	ENSCAFT00030016825.1	UniProtKB/TrEMBL
	ENSCAFT00040039863.1	UniProtKB/TrEMBL
	ENSCAFT00040039901.1	UniProtKB/TrEMBL
	ENSCAFT00845046509.1	UniProtKB/TrEMBL
	ENSCAFT00845046585.1	UniProtKB/TrEMBL
	ENSCAFT00845046659	ENTREZGENE
	ENSCAFT00845046659.1	UniProtKB/TrEMBL
	ENSCAFT00845046702	ENTREZGENE
	ENSCAFT00845046702.1	UniProtKB/TrEMBL
	ENSCAFT00845046746.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.33.40	UniProtKB/TrEMBL
	3.30.530.20	UniProtKB/TrEMBL
InterPro	Chaperonin_GroES	UniProtKB/TrEMBL
	Chaperonin_GroES_sf	UniProtKB/TrEMBL
	Chaprnonin_Cpn10_CS	UniProtKB/TrEMBL
	COQ10-like	UniProtKB/TrEMBL
	COQ10_START	UniProtKB/TrEMBL
	GroES-like_sf	UniProtKB/TrEMBL
	START-like_dom_sf	UniProtKB/TrEMBL
NCBI Gene	COQ10B	ENTREZGENE
PANTHER	10 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	UniProtKB/TrEMBL
	COENZYME Q-BINDING PROTEIN COQ10 HOMOLOG B, MITOCHONDRIAL	UniProtKB/TrEMBL
	PTHR10772	UniProtKB/TrEMBL
	PTHR12901	UniProtKB/TrEMBL
Pfam	Cpn10	UniProtKB/TrEMBL
	Polyketide_cyc	UniProtKB/TrEMBL
PRINTS	CHAPERONIN10	UniProtKB/TrEMBL
PROSITE	CHAPERONINS_CPN10	UniProtKB/TrEMBL
SMART	Cpn10	UniProtKB/TrEMBL
Superfamily-SCOP	Bet v1-like	UniProtKB/TrEMBL
	SSF50129	UniProtKB/TrEMBL
UniProt	A0A8C0JWA3	ENTREZGENE
	A0A8C0MXW0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z3Y6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PP40_CANLF	UniProtKB/TrEMBL
	A0A8I3PPK0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PT43_CANLF	UniProtKB/TrEMBL
	A0A8I3PXZ7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3Q9W0	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:57378	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar