Ppp1r1a (protein phosphatase 1 regulatory inhibitor subunit 1A) - Rat Genome Database

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Gene: Ppp1r1a (protein phosphatase 1 regulatory inhibitor subunit 1A) Heterocephalus glaber
Analyze
Symbol: Ppp1r1a
Name: protein phosphatase 1 regulatory inhibitor subunit 1A
RGD ID: 18923322
Description: ENCODES a protein that exhibits protein phosphatase inhibitor activity (inferred); INVOLVED IN glycogen metabolic process (inferred); intracellular signal transduction (inferred); signal transduction (inferred); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Protein phosphatase 1 regulatory subunit 1A
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249042,608,895 - 2,617,543 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249042,608,891 - 2,617,202 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ppp1r1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249042,608,895 - 2,617,543 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249042,608,891 - 2,617,202 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
PPP1R1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381254,579,246 - 54,588,659 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1254,575,387 - 54,588,659 (-)EnsemblGRCh38hg38GRCh38
GRCh371254,973,030 - 54,982,443 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361253,259,291 - 53,268,710 (-)NCBINCBI36Build 36hg18NCBI36
Build 341253,259,299 - 53,268,707NCBI
Celera1254,624,894 - 54,634,311 (-)NCBICelera
Cytogenetic Map12q13.2NCBI
HuRef1252,011,832 - 52,016,913 (-)NCBIHuRef
CHM1_11254,939,731 - 54,949,148 (-)NCBICHM1_1
T2T-CHM13v2.01254,545,797 - 54,555,209 (-)NCBIT2T-CHM13v2.0
Ppp1r1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3915103,438,706 - 103,446,465 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl15103,438,706 - 103,446,430 (-)EnsemblGRCm39 Ensembl
GRCm3815103,530,279 - 103,538,027 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl15103,530,279 - 103,538,003 (-)EnsemblGRCm38mm10GRCm38
MGSCv3715103,360,710 - 103,368,423 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3615103,358,313 - 103,365,995 (-)NCBIMGSCv36mm8
Celera15105,688,277 - 105,695,984 (-)NCBICelera
Cytogenetic Map15F3NCBI
cM Map1559.01NCBI
Ppp1r1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87136,533,031 - 136,540,687 (-)NCBIGRCr8
mRatBN7.27134,654,578 - 134,662,236 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7134,654,579 - 134,662,230 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7136,410,417 - 136,418,114 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07138,639,788 - 138,647,485 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07138,625,389 - 138,633,131 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07145,146,480 - 145,154,131 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7145,146,481 - 145,154,131 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07142,925,730 - 142,933,709 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47142,428,730 - 142,436,381 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17142,508,919 - 142,516,570 (-)NCBI
Celera7131,078,656 - 131,086,307 (-)NCBICelera
Cytogenetic Map7q36NCBI
Ppp1r1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554581,819,366 - 1,823,867 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554581,819,366 - 1,823,864 (-)NCBIChiLan1.0ChiLan1.0
PPP1R1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21039,586,156 - 39,594,552 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11239,582,925 - 39,591,321 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01234,158,956 - 34,167,350 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11234,887,168 - 34,896,360 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1234,882,975 - 34,898,218 (+)Ensemblpanpan1.1panPan2
PPP1R1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.127766,757 - 770,994 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl27766,338 - 771,598 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2745,482,576 - 45,490,666 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.027761,676 - 770,078 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl27761,653 - 770,038 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.127754,299 - 762,405 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.027762,376 - 770,488 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02745,886,785 - 45,894,624 (-)NCBIUU_Cfam_GSD_1.0
Ppp1r1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494561,389,455 - 61,397,676 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493651211,767,172 - 11,775,573 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493651211,765,769 - 11,775,573 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPP1R1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl519,753,847 - 19,763,269 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1519,753,850 - 19,763,281 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PPP1R1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11150,695,896 - 50,704,191 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1150,696,032 - 50,704,219 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037195,332,472 - 195,341,778 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000004677   ⟹   ENSHGLP00000004615
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046249042,608,895 - 2,617,543 (-)Ensembl
RefSeq Acc Id: XM_004872812   ⟹   XP_004872869
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249042,608,891 - 2,617,202 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004872869 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB09041 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000004615
  ENSHGLP00000056578
  ENSHGLP00100046652
GenBank Protein JAO02702 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004872869   ⟸   XM_004872812
- UniProtKB: G5BID0 (UniProtKB/TrEMBL),   A0A0N8EUQ4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000004615   ⟸   ENSHGLT00000004677


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000003378 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSHGLG00100033433 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000004677 ENTREZGENE
  ENSHGLT00000064561 UniProtKB/TrEMBL
  ENSHGLT00100080166 UniProtKB/TrEMBL
InterPro PPP1R1A/B/C UniProtKB/TrEMBL
KEGG Report hgl:101717329 UniProtKB/TrEMBL
NCBI Gene Ppp1r1a ENTREZGENE
PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1A UniProtKB/TrEMBL
  PTHR15417 UniProtKB/TrEMBL
Pfam DARPP-32 UniProtKB/TrEMBL
UniProt A0A0N8EUQ4 ENTREZGENE, UniProtKB/TrEMBL
  G5BID0 ENTREZGENE, UniProtKB/TrEMBL