Etnppl (ethanolamine-phosphate phospho-lyase) - Rat Genome Database

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Gene: Etnppl (ethanolamine-phosphate phospho-lyase) Heterocephalus glaber
Analyze
Symbol: Etnppl
Name: ethanolamine-phosphate phospho-lyase
RGD ID: 18922076
Description: ENCODES a protein that exhibits ethanolamine-phosphate phospho-lyase activity (inferred); lyase activity (inferred); pyridoxal phosphate binding (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Alanine--glyoxylate aminotransferase 2-like 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624830924,185 - 938,388 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624830923,034 - 938,773 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Etnppl
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624830924,185 - 938,388 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624830923,034 - 938,773 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ETNPPL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384108,742,053 - 108,763,053 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4108,742,048 - 108,763,054 (-)EnsemblGRCh38hg38GRCh38
GRCh374109,663,209 - 109,684,209 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364109,882,645 - 109,903,658 (-)NCBINCBI36Build 36hg18NCBI36
Build 344110,020,807 - 110,041,813NCBI
Celera4106,958,027 - 106,978,961 (-)NCBICelera
Cytogenetic Map4q25NCBI
HuRef4105,395,013 - 105,416,012 (-)NCBIHuRef
CHM1_14109,639,905 - 109,660,851 (-)NCBICHM1_1
T2T-CHM13v2.04112,045,047 - 112,066,004 (-)NCBIT2T-CHM13v2.0
Etnppl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393130,411,097 - 130,429,399 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3130,411,097 - 130,431,170 (+)EnsemblGRCm39 Ensembl
GRCm383130,617,448 - 130,635,750 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3130,617,448 - 130,637,521 (+)EnsemblGRCm38mm10GRCm38
MGSCv373130,320,366 - 130,338,668 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363130,606,730 - 130,624,903 (+)NCBIMGSCv36mm8
Celera3137,132,851 - 137,151,194 (+)NCBICelera
Cytogenetic Map3G3NCBI
cM Map360.47NCBI
Etnppl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82221,847,210 - 221,868,827 (+)NCBIGRCr8
mRatBN7.22219,173,048 - 219,194,646 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2219,172,978 - 219,192,212 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.02235,738,377 - 235,760,351 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2235,738,416 - 235,760,352 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02254,289,706 - 254,309,474 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2211,440,271 - 211,459,741 (+)NCBICelera
Cytogenetic Map2q43NCBI
Etnppl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554961,275,051 - 1,292,349 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554961,274,929 - 1,292,802 (+)NCBIChiLan1.0ChiLan1.0
ETNPPL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23106,838,230 - 106,859,275 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14107,133,189 - 107,154,245 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04101,244,460 - 101,265,672 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14111,815,214 - 111,836,412 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4111,815,226 - 111,836,412 (-)Ensemblpanpan1.1panPan2
ETNPPL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13229,073,846 - 29,093,077 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3228,963,168 - 29,093,101 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3212,927,060 - 12,947,164 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03229,302,397 - 29,322,276 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3229,302,405 - 29,321,527 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13229,296,692 - 29,316,808 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03229,041,213 - 29,060,278 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03210,794,955 - 10,814,884 (+)NCBIUU_Cfam_GSD_1.0
Etnppl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530111,876,410 - 11,894,779 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493656356,776 - 74,403 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493656356,216 - 74,591 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ETNPPL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8113,363,042 - 113,384,774 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18113,363,047 - 113,384,783 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28121,603,071 - 121,622,426 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ETNPPL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1756,670,688 - 56,692,069 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl756,669,718 - 56,691,026 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603735,296,344 - 35,316,825 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000006190   ⟹   ENSHGLP00000006115
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624830924,185 - 938,388 (+)Ensembl
RefSeq Acc Id: XM_004866210   ⟹   XP_004866267
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624830924,101 - 938,773 (+)NCBI
RefSeq Acc Id: XM_021245434   ⟹   XP_021101093
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624830923,731 - 938,773 (+)NCBI
RefSeq Acc Id: XM_021245435   ⟹   XP_021101094
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624830923,034 - 938,773 (+)NCBI
RefSeq Acc Id: XM_021245436   ⟹   XP_021101095
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624830924,101 - 937,411 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004866267 (Get FASTA)   NCBI Sequence Viewer  
  XP_021101093 (Get FASTA)   NCBI Sequence Viewer  
  XP_021101094 (Get FASTA)   NCBI Sequence Viewer  
  XP_021101095 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHA99327 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000006115
Reference Protein Sequences
RefSeq Acc Id: XP_021101094   ⟸   XM_021245435
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021101093   ⟸   XM_021245434
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004866267   ⟸   XM_004866210
- Peptide Label: isoform X3
- UniProtKB: G5AQL4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021101095   ⟸   XM_021245436
- Peptide Label: isoform X4
- UniProtKB: G5AQL4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000006115   ⟸   ENSHGLT00000006190


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000004469 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000006190 ENTREZGENE
Gene3D-CATH Aspartate Aminotransferase, domain 1 UniProtKB/TrEMBL
  Type I PLP-dependent aspartate aminotransferase-like (Major domain) UniProtKB/TrEMBL
InterPro Aminotrans_3 UniProtKB/TrEMBL
  Aminotrans_3_PPA_site UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_major UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_small UniProtKB/TrEMBL
NCBI Gene Etnppl ENTREZGENE
PANTHER ETHANOLAMINE-PHOSPHATE PHOSPHO-LYASE UniProtKB/TrEMBL
  PTHR45688 UniProtKB/TrEMBL
Pfam Aminotran_3 UniProtKB/TrEMBL
PROSITE AA_TRANSFER_CLASS_3 UniProtKB/TrEMBL
Superfamily-SCOP PLP-dependent transferases UniProtKB/TrEMBL
UniProt G5AQL4 ENTREZGENE, UniProtKB/TrEMBL