Ugt8 (UDP glycosyltransferase 8) - Rat Genome Database

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Gene: Ugt8 (UDP glycosyltransferase 8) Heterocephalus glaber
Analyze
Symbol: Ugt8
Name: UDP glycosyltransferase 8
RGD ID: 18921812
Description: ENCODES a protein that exhibits UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN response to immobilization stress (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; FOUND IN endoplasmic reticulum (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 2-hydroxyacylsphingosine 1-beta-galactosyltransferase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248671,182,589 - 1,255,796 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248671,182,674 - 1,255,714 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Ugt8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248671,182,589 - 1,255,796 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248671,182,674 - 1,255,714 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
UGT8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384114,598,402 - 114,678,225 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4114,598,770 - 114,678,588 (+)EnsemblGRCh38hg38GRCh38
GRCh374115,519,558 - 115,599,381 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364115,762,972 - 115,817,201 (+)NCBINCBI36Build 36hg18NCBI36
Build 344115,901,126 - 115,955,356NCBI
Celera4112,813,079 - 112,891,640 (+)NCBICelera
Cytogenetic Map4q26NCBI
HuRef4111,253,852 - 111,332,365 (+)NCBIHuRef
CHM1_14115,496,077 - 115,574,635 (+)NCBICHM1_1
T2T-CHM13v2.04117,901,444 - 117,981,528 (+)NCBIT2T-CHM13v2.0
Ugt8a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393125,655,071 - 125,732,301 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3125,658,920 - 125,732,268 (-)EnsemblGRCm39 Ensembl
GRCm383125,865,272 - 125,938,682 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3125,865,271 - 125,938,619 (-)EnsemblGRCm38mm10GRCm38
MGSCv373125,568,261 - 125,641,468 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363125,857,534 - 125,907,483 (-)NCBIMGSCv36mm8
Celera3132,313,587 - 132,366,589 (-)NCBICelera
Cytogenetic Map3G1NCBI
cM Map354.68NCBI
Ugt8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82216,938,884 - 217,007,167 (-)NCBIGRCr8
mRatBN7.22214,264,483 - 214,332,769 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2214,264,483 - 214,332,660 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2221,935,494 - 222,003,681 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02219,835,423 - 219,903,608 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02214,689,623 - 214,757,812 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02229,644,373 - 229,718,678 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2229,644,382 - 229,718,659 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02248,998,871 - 249,072,741 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42222,977,966 - 223,048,277 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1436,844,752 - 36,845,448 (+)NCBI
Celera2206,609,425 - 206,656,289 (-)NCBICelera
Cytogenetic Map2q42NCBI
Ugt8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542824,800,854 - 24,865,378 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542824,800,854 - 24,864,904 (-)NCBIChiLan1.0ChiLan1.0
UGT8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23112,702,522 - 112,788,302 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14112,993,894 - 113,079,701 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04107,113,476 - 107,199,272 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14117,676,804 - 117,762,363 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4117,676,810 - 117,762,729 (+)Ensemblpanpan1.1panPan2
UGT8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13234,148,874 - 34,250,891 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3234,179,247 - 34,233,116 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha327,771,814 - 7,877,424 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03234,375,940 - 34,480,809 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3234,194,392 - 34,547,378 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13234,352,188 - 34,479,955 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03234,121,751 - 34,227,483 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0325,634,135 - 5,739,686 (-)NCBIUU_Cfam_GSD_1.0
Ugt8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053016,603,659 - 6,685,574 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365635,224,173 - 5,306,120 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365635,251,451 - 5,305,683 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UGT8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8108,233,143 - 108,314,921 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18108,233,134 - 108,315,284 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28115,965,708 - 115,974,792 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UGT8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1762,380,506 - 62,465,695 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl762,381,223 - 62,466,401 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603741,154,173 - 41,238,937 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000000727   ⟹   ENSHGLP00000000687
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248671,182,589 - 1,255,796 (+)Ensembl
RefSeq Acc Id: XM_004870034   ⟹   XP_004870091
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248671,182,675 - 1,255,714 (+)NCBI
RefSeq Acc Id: XM_004870035   ⟹   XP_004870092
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248671,182,674 - 1,255,714 (+)NCBI
RefSeq Acc Id: XM_021248465   ⟹   XP_021104124
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248671,182,674 - 1,255,714 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004870091 (Get FASTA)   NCBI Sequence Viewer  
  XP_004870092 (Get FASTA)   NCBI Sequence Viewer  
  XP_021104124 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000000687
  ENSHGLP00100000831
GenBank Protein JAO03614 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004870092   ⟸   XM_004870035
- UniProtKB: A0A0N8EV18 (UniProtKB/TrEMBL),   G5AVC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021104124   ⟸   XM_021248465
- UniProtKB: A0A0N8EV18 (UniProtKB/TrEMBL),   G5AVC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004870091   ⟸   XM_004870034
- UniProtKB: A0A0N8EV18 (UniProtKB/TrEMBL),   G5AVC6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000000687   ⟸   ENSHGLT00000000727


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000000589 Ensembl, ENTREZGENE
  ENSHGLG00100000682 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000000727 ENTREZGENE
  ENSHGLT00100000863 UniProtKB/TrEMBL
Gene3D-CATH Glycogen Phosphorylase B UniProtKB/TrEMBL
InterPro UDP-glycosyltransferase UniProtKB/TrEMBL
  UDP_glucos_trans UniProtKB/TrEMBL
  UDP_glycos_trans_CS UniProtKB/TrEMBL
KEGG Report hgl:101702896 UniProtKB/TrEMBL
NCBI Gene Ugt8 ENTREZGENE
PANTHER 2-HYDROXYACYLSPHINGOSINE 1-BETA-GALACTOSYLTRANSFERASE UniProtKB/TrEMBL
  EG:EG0003.4 PROTEIN-RELATED UniProtKB/TrEMBL
Pfam UDPGT UniProtKB/TrEMBL
PROSITE UDPGT UniProtKB/TrEMBL
Superfamily-SCOP UDP-Glycosyltransferase/glycogen phosphorylase UniProtKB/TrEMBL
UniProt A0A0N8EV18 ENTREZGENE, UniProtKB/TrEMBL
  G5AVC6 ENTREZGENE, UniProtKB/TrEMBL