Inhbc (inhibin subunit beta C) - Rat Genome Database

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Gene: Inhbc (inhibin subunit beta C) Heterocephalus glaber
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Symbol: Inhbc
Name: inhibin subunit beta C
RGD ID: 18920363
Description: ENCODES a protein that exhibits cytokine activity (inferred); growth factor activity (inferred); hormone activity (inferred); INVOLVED IN signal transduction (inferred); ASSOCIATED WITH cataract 15 multiple types (ortholog); Charcot-Marie-Tooth disease axonal type 2U (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: inhibin beta C chain; inhibin beta C chain preproprotein; inhibin beta C subunit
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480210,501,502 - 10,518,188 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480210,503,431 - 10,517,383 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Inhbc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480210,501,502 - 10,518,188 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480210,503,431 - 10,517,383 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
INHBC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381257,434,784 - 57,452,062 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1257,434,784 - 57,452,062 (+)EnsemblGRCh38hg38GRCh38
GRCh371257,828,567 - 57,845,845 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361256,114,810 - 56,130,876 (+)NCBINCBI36Build 36hg18NCBI36
Build 341256,114,809 - 56,130,876NCBI
Celera1257,482,525 - 57,498,596 (+)NCBICelera
Cytogenetic Map12q13.3NCBI
HuRef1254,866,296 - 54,882,363 (+)NCBIHuRef
CHM1_11257,796,669 - 57,812,718 (+)NCBICHM1_1
T2T-CHM13v2.01257,403,060 - 57,420,351 (+)NCBIT2T-CHM13v2.0
Inhbc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910127,192,191 - 127,206,417 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10127,192,191 - 127,206,300 (-)EnsemblGRCm39 Ensembl
GRCm3810127,356,322 - 127,370,548 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,356,322 - 127,370,431 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710126,793,381 - 126,807,600 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610126,759,271 - 126,773,379 (-)NCBIMGSCv36mm8
Celera10129,748,821 - 129,762,882 (-)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.5NCBI
Inhbc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8765,069,450 - 65,082,919 (-)NCBIGRCr8
mRatBN7.2763,184,141 - 63,197,630 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl763,184,142 - 63,197,630 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx765,073,432 - 65,086,889 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0767,275,858 - 67,289,319 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0767,077,119 - 67,090,617 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0770,648,005 - 70,661,475 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl770,646,519 - 70,661,891 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0770,822,284 - 70,835,753 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,315,295 - 67,328,764 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1767,336,025 - 67,349,494 (-)NCBI
Celera760,324,150 - 60,337,619 (-)NCBICelera
Cytogenetic Map7q22NCBI
Inhbc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554585,148,923 - 5,173,136 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554585,148,923 - 5,173,136 (+)NCBIChiLan1.0ChiLan1.0
INHBC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21036,888,108 - 36,909,002 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11236,884,878 - 36,905,696 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01231,473,809 - 31,494,746 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11231,730,166 - 31,747,905 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1231,732,208 - 31,747,391 (-)Ensemblpanpan1.1panPan2
INHBC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1101,546,654 - 1,558,631 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl101,547,075 - 1,558,645 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha101,610,134 - 1,622,016 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0101,555,915 - 1,567,798 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl101,555,818 - 1,567,807 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1101,534,000 - 1,545,894 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0101,775,521 - 1,787,401 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0101,900,831 - 1,912,720 (+)NCBIUU_Cfam_GSD_1.0
Inhbc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494557,259,010 - 57,266,973 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366461,603,276 - 1,610,051 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366461,603,276 - 1,610,051 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
INHBC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl522,718,491 - 22,730,087 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1522,718,416 - 22,728,766 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2524,639,066 - 24,770,072 (-)NCBISscrofa10.2Sscrofa10.2susScr3
INHBC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11153,340,873 - 53,362,950 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1153,348,742 - 53,362,269 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037192,604,709 - 192,621,019 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000023686   ⟹   ENSHGLP00000023469
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462480210,501,502 - 10,518,188 (-)Ensembl
RefSeq Acc Id: XM_004861235   ⟹   XP_004861292
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462480210,503,431 - 10,517,383 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004861292 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000023469
  ENSHGLP00100044679
GenBank Protein JAN96165 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004861292   ⟸   XM_004861235
- UniProtKB: A0A0N8ESD7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000023469   ⟸   ENSHGLT00000023686


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000016737 Ensembl, ENTREZGENE
  ENSHGLG00100041708 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000023686 ENTREZGENE
  ENSHGLT00100087694 UniProtKB/TrEMBL
Gene3D-CATH 2.10.90.10 UniProtKB/TrEMBL
  2.60.120.970 UniProtKB/TrEMBL
InterPro Cystine-knot_cytokine UniProtKB/TrEMBL
  Inhibin_betaC UniProtKB/TrEMBL
  TGF-b_C UniProtKB/TrEMBL
  TGF-beta-rel UniProtKB/TrEMBL
  TGFb_CS UniProtKB/TrEMBL
NCBI Gene Inhbc ENTREZGENE
PANTHER INHIBIN BETA C CHAIN UniProtKB/TrEMBL
  PTHR11848 UniProtKB/TrEMBL
Pfam TGF_beta UniProtKB/TrEMBL
PRINTS INHIBINBC UniProtKB/TrEMBL
PROSITE TGF_BETA_1 UniProtKB/TrEMBL
  TGF_BETA_2 UniProtKB/TrEMBL
SMART TGFB UniProtKB/TrEMBL
Superfamily-SCOP SSF57501 UniProtKB/TrEMBL
UniProt A0A0N8ESD7 ENTREZGENE, UniProtKB/TrEMBL