Ccdc91 (coiled-coil domain containing 91) - Rat Genome Database

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Gene: Ccdc91 (coiled-coil domain containing 91) Heterocephalus glaber
Analyze
Symbol: Ccdc91
Name: coiled-coil domain containing 91
RGD ID: 18916232
Description: INVOLVED IN Golgi to lysosome transport (inferred); Golgi vesicle transport (inferred); ASSOCIATED WITH autistic disorder (ortholog); substance-related disorder (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: coiled-coil domain-containing protein 91
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247787,313,233 - 7,674,279 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247787,312,565 - 7,693,256 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Ccdc91
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247787,313,233 - 7,674,279 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247787,312,565 - 7,693,256 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
CCDC91
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381228,190,456 - 28,550,166 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1228,133,249 - 28,581,511 (+)EnsemblGRCh38hg38GRCh38
GRCh371228,343,389 - 28,703,099 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361228,301,400 - 28,594,366 (+)NCBINCBI36Build 36hg18NCBI36
Celera1233,556,106 - 33,849,062 (+)NCBICelera
Cytogenetic Map12p11.22NCBI
HuRef1228,179,425 - 28,472,510 (+)NCBIHuRef
CHM1_11228,375,515 - 28,668,272 (+)NCBICHM1_1
T2T-CHM13v2.01228,062,559 - 28,422,616 (+)NCBIT2T-CHM13v2.0
Ccdc91
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396147,377,322 - 147,534,110 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6147,377,326 - 147,534,110 (+)EnsemblGRCm39 Ensembl
GRCm386147,475,871 - 147,632,613 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6147,475,828 - 147,632,612 (+)EnsemblGRCm38mm10GRCm38
MGSCv376147,424,393 - 147,581,134 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366147,433,041 - 147,589,782 (+)NCBIMGSCv36mm8
Celera6150,517,430 - 150,681,959 (+)NCBICelera
Cytogenetic Map6G3NCBI
cM Map678.22NCBI
Ccdc91
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84182,132,931 - 182,304,948 (+)NCBIGRCr8
mRatBN7.24180,402,327 - 180,574,364 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4180,402,376 - 180,574,364 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4186,685,689 - 186,856,364 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04182,470,232 - 182,640,907 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04181,090,664 - 181,261,351 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04181,873,465 - 182,043,593 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4181,874,861 - 182,043,593 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04246,021,504 - 246,189,263 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44185,103,274 - 185,258,770 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14185,348,397 - 185,503,894 (+)NCBI
Celera4168,885,253 - 169,056,949 (+)NCBICelera
Cytogenetic Map4q44NCBI
Ccdc91
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555056,266,918 - 6,535,059 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555056,269,667 - 6,613,191 (-)NCBIChiLan1.0ChiLan1.0
CCDC91
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21068,237,448 - 68,625,817 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11268,233,842 - 68,628,769 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01257,678,990 - 58,123,663 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11260,384,048 - 60,741,781 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1260,385,041 - 60,676,959 (-)Ensemblpanpan1.1panPan2
CCDC91
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12719,234,731 - 19,579,901 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2719,229,925 - 19,579,817 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2726,825,592 - 27,151,728 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02719,441,434 - 19,773,606 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2719,435,677 - 19,773,599 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12719,254,969 - 19,580,998 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02719,281,701 - 19,607,288 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02726,977,430 - 27,310,304 (+)NCBIUU_Cfam_GSD_1.0
Ccdc91
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494581,197,835 - 81,520,217 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936760486,621 - 735,719 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936760413,066 - 735,508 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCDC91
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl545,138,057 - 45,525,650 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1545,138,162 - 45,525,661 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2548,837,142 - 48,878,336 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CCDC91
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11127,913,958 - 28,267,606 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1127,914,739 - 28,267,599 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660696,773,329 - 7,131,452 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004855070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013075982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021236576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021236577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021236578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021236580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021236581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021236582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01056752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01056774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GEBF01001466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000014528   ⟹   ENSHGLP00000014384
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247787,313,233 - 7,674,279 (-)Ensembl
RefSeq Acc Id: XM_004855070   ⟹   XP_004855127
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247787,312,565 - 7,693,253 (-)NCBI
RefSeq Acc Id: XM_013075982   ⟹   XP_012931436
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247787,312,565 - 7,578,523 (-)NCBI
RefSeq Acc Id: XM_021236576   ⟹   XP_021092235
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247787,312,565 - 7,693,254 (-)NCBI
RefSeq Acc Id: XM_021236577   ⟹   XP_021092236
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247787,313,648 - 7,693,255 (-)NCBI
RefSeq Acc Id: XM_021236578   ⟹   XP_021092237
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247787,312,565 - 7,693,256 (-)NCBI
RefSeq Acc Id: XM_021236580   ⟹   XP_021092239
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247787,312,565 - 7,693,255 (-)NCBI
RefSeq Acc Id: XM_021236581   ⟹   XP_021092240
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247787,312,565 - 7,693,254 (-)NCBI
RefSeq Acc Id: XM_021236582   ⟹   XP_021092241
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247787,312,565 - 7,693,255 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_021092237   ⟸   XM_021236578
- Peptide Label: isoform X5
- UniProtKB: A0A0P6JGS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021092241   ⟸   XM_021236582
- Peptide Label: isoform X8
- UniProtKB: A0A0P6JGS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021092239   ⟸   XM_021236580
- Peptide Label: isoform X6
RefSeq Acc Id: XP_021092240   ⟸   XM_021236581
- Peptide Label: isoform X7
- UniProtKB: A0A0P6JGS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021092235   ⟸   XM_021236576
- Peptide Label: isoform X1
- UniProtKB: A0A0P6JGS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004855127   ⟸   XM_004855070
- Peptide Label: isoform X2
- UniProtKB: A0A0P6JGS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012931436   ⟸   XM_013075982
- Peptide Label: isoform X4
- UniProtKB: A0A0P6JGS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021092236   ⟸   XM_021236577
- Peptide Label: isoform X3
- UniProtKB: A0A0P6JGS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000014384   ⟸   ENSHGLT00000014528


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000010299 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSHGLG00100007351 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000014528 ENTREZGENE
  ENSHGLT00000044733 UniProtKB/TrEMBL
  ENSHGLT00100066910 UniProtKB/TrEMBL
InterPro CCDC91 UniProtKB/TrEMBL
NCBI Gene Ccdc91 ENTREZGENE
PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 91 UniProtKB/TrEMBL
  PTHR35072 UniProtKB/TrEMBL
UniProt A0A0P6JGS3 ENTREZGENE, UniProtKB/TrEMBL