Arhgap33 (Rho GTPase activating protein 33) - Rat Genome Database

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Gene: Arhgap33 (Rho GTPase activating protein 33) Heterocephalus glaber
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Symbol: Arhgap33
Name: Rho GTPase activating protein 33
RGD ID: 18911254
Description: ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of dendritic spine morphogenesis (ortholog); regulation of postsynapse assembly (ortholog); response to toxic substance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Brugada syndrome 5 (ortholog); disease of mental health (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: rho GTPase-activating protein 33
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479410,075,462 - 10,088,958 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479410,075,329 - 10,089,356 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Arhgap33
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479410,075,462 - 10,088,958 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479410,075,329 - 10,089,356 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ARHGAP33
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381935,775,564 - 35,788,822 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1935,774,532 - 35,788,822 (+)EnsemblGRCh38hg38GRCh38
GRCh371936,266,466 - 36,279,724 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361940,958,316 - 40,971,564 (+)NCBINCBI36Build 36hg18NCBI36
Build 341940,958,315 - 40,971,564NCBI
Celera1932,979,892 - 32,993,199 (+)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1932,771,250 - 32,784,558 (+)NCBIHuRef
CHM1_11936,267,718 - 36,281,025 (+)NCBICHM1_1
T2T-CHM13v2.01938,320,866 - 38,334,124 (+)NCBIT2T-CHM13v2.0
Arhgap33
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,221,651 - 30,234,596 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl730,221,651 - 30,234,485 (-)EnsemblGRCm39 Ensembl
GRCm38730,522,225 - 30,535,171 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,522,226 - 30,535,060 (-)EnsemblGRCm38mm10GRCm38
MGSCv37731,307,245 - 31,320,028 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36730,230,986 - 30,243,769 (-)NCBIMGSCv36mm8
Celera725,113,538 - 25,126,798 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map718.43NCBI
Arhgap33
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8194,903,566 - 94,917,074 (-)NCBIGRCr8
mRatBN7.2185,776,112 - 85,789,767 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl185,776,108 - 85,789,678 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0188,977,460 - 88,990,780 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl188,978,344 - 88,989,552 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0190,132,465 - 90,145,782 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4185,568,846 - 85,581,069 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera180,147,918 - 80,160,861 (-)NCBICelera
Cytogenetic Map1q21NCBI
Arhgap33
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554682,769,493 - 2,783,155 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554682,769,108 - 2,783,746 (-)NCBIChiLan1.0ChiLan1.0
ARHGAP33
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22041,769,327 - 41,783,117 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11943,754,625 - 43,768,439 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01932,704,877 - 32,710,778 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11941,438,870 - 41,452,173 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1941,439,010 - 41,452,173 (+)Ensemblpanpan1.1panPan2
ARHGAP33
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11116,851,341 - 116,864,696 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1116,851,328 - 116,864,561 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1116,256,654 - 116,269,983 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01117,454,351 - 117,467,681 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1117,454,358 - 117,467,680 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11117,017,748 - 117,031,089 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01116,641,363 - 116,654,689 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01117,696,728 - 117,710,063 (-)NCBIUU_Cfam_GSD_1.0
Arhgap33
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934911,092,833 - 11,106,043 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936570539,830 - 553,086 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936570539,839 - 553,018 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGAP33
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl645,199,456 - 45,213,653 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1645,198,657 - 45,213,655 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2640,643,417 - 40,645,900 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGAP33
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1630,684,679 - 30,697,943 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl630,684,731 - 30,697,556 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660738,476,038 - 8,489,309 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000011130   ⟹   ENSHGLP00000011007
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479410,075,462 - 10,088,958 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000011131   ⟹   ENSHGLP00000011008
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479410,076,184 - 10,088,958 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000011132   ⟹   ENSHGLP00000011009
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462479410,076,184 - 10,087,144 (+)Ensembl
RefSeq Acc Id: XM_004858938   ⟹   XP_004858995
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479410,075,329 - 10,089,356 (+)NCBI
RefSeq Acc Id: XM_013077386   ⟹   XP_012932840
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479410,075,665 - 10,089,356 (+)NCBI
RefSeq Acc Id: XM_021239426   ⟹   XP_021095085
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462479410,079,022 - 10,089,356 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004858995 (Get FASTA)   NCBI Sequence Viewer  
  XP_012932840 (Get FASTA)   NCBI Sequence Viewer  
  XP_021095085 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000011007
  ENSHGLP00000011008
RefSeq Acc Id: XP_004858995   ⟸   XM_004858938
- Peptide Label: isoform X1
- UniProtKB: A0AAX6PTG9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012932840   ⟸   XM_013077386
- Peptide Label: isoform X3
- UniProtKB: A0AAX6R1B7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021095085   ⟸   XM_021239426
- Peptide Label: isoform X2
- UniProtKB: A0AAX6RD36 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000011007   ⟸   ENSHGLT00000011130
Ensembl Acc Id: ENSHGLP00000011009   ⟸   ENSHGLT00000011132
Ensembl Acc Id: ENSHGLP00000011008   ⟸   ENSHGLT00000011131


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000007897 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000011130 ENTREZGENE
  ENSHGLT00000011131 ENTREZGENE
NCBI Gene Arhgap33 ENTREZGENE
UniProt A0AAX6PTG9 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6R1B7 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6RD36 ENTREZGENE, UniProtKB/TrEMBL