CUNH2orf74 (chromosome unknown C2orf74 homolog) - Rat Genome Database

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Gene: CUNH2orf74 (chromosome unknown C2orf74 homolog) Heterocephalus glaber
Analyze
Symbol: CUNH2orf74 (Ensembl: C2orf74)
Name: chromosome unknown C2orf74 homolog (Ensembl:chromosome 2 open reading frame 74)
RGD ID: 18908359
Description: ASSOCIATED WITH peroxisome biogenesis disorder 11A (ortholog); visceral heterotaxy (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein C2orf74; uncharacterized protein C2orf74 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624833746,124 - 749,415 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624833746,419 - 748,845 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

Molecular Function

References

Genomics

Comparative Map Data
CUNH2orf74
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624833746,124 - 749,415 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624833746,419 - 748,845 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
C2orf74
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38261,145,116 - 61,164,828 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl261,145,068 - 61,164,828 (+)EnsemblGRCh38hg38GRCh38
GRCh37261,372,251 - 61,391,963 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36261,225,792 - 61,245,468 (+)NCBINCBI36Build 36hg18NCBI36
Celera261,215,846 - 61,236,014 (+)NCBICelera
Cytogenetic Map2p15NCBI
HuRef261,113,262 - 61,133,063 (+)NCBIHuRef
CHM1_1261,302,780 - 61,322,493 (+)NCBICHM1_1
T2T-CHM13v2.0261,150,976 - 61,170,676 (+)NCBIT2T-CHM13v2.0
1700093K21Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391123,466,203 - 23,471,915 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1123,466,203 - 23,471,155 (-)EnsemblGRCm39 Ensembl
GRCm381123,516,202 - 23,521,319 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1123,516,203 - 23,521,155 (-)EnsemblGRCm38mm10GRCm38
MGSCv371123,416,203 - 23,419,942 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361123,416,203 - 23,419,195 (-)NCBIMGSCv36mm8
Celera1125,643,964 - 25,647,707 (-)NCBICelera
Cytogenetic Map11A3.2NCBI
cM Map1114.32NCBI
C14h2orf74
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814101,694,721 - 101,697,842 (-)NCBIGRCr8
mRatBN7.21497,493,579 - 97,496,697 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1497,493,658 - 97,496,679 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx14101,825,814 - 101,828,841 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.014103,070,175 - 103,073,202 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01499,541,741 - 99,544,768 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.014108,281,908 - 108,285,008 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14108,281,907 - 108,285,008 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014105,117,765 - 105,120,865 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414104,443,532 - 104,446,553 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1496,470,624 - 96,473,645 (-)NCBICelera
Cytogenetic Map14q22NCBI
CUNH2orf74
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542422,709,676 - 22,712,178 (-)NCBIChiLan1.0ChiLan1.0
C12H2orf74
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21265,212,265 - 65,232,116 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A65,216,227 - 65,236,067 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A61,236,580 - 61,256,389 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A62,377,116 - 62,395,225 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A62,392,633 - 62,395,225 (+)Ensemblpanpan1.1panPan2
C10H2orf74
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11061,199,711 - 61,231,862 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1061,229,922 - 61,231,834 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1061,089,577 - 61,121,728 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01062,208,401 - 62,240,704 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1062,238,753 - 62,240,667 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11061,911,317 - 61,943,472 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01062,195,570 - 62,228,168 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01062,491,291 - 62,523,461 (+)NCBIUU_Cfam_GSD_1.0
CUNH2orf74
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629221,913,425 - 21,917,216 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364916,654,380 - 6,657,560 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364916,654,389 - 6,657,560 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C3H2orf74
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl380,626,159 - 80,648,230 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1380,626,056 - 80,651,084 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2384,514,795 - 84,517,948 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH2orf74
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11445,819,831 - 45,824,090 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1445,820,129 - 45,822,162 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604565,963,324 - 65,981,598 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000027173   ⟹   ENSHGLP00000026934
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624833746,124 - 749,415 (-)Ensembl
RefSeq Acc Id: XM_013066430   ⟹   XP_012921884
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624833746,419 - 748,840 (-)NCBI
RefSeq Acc Id: XM_021246316   ⟹   XP_021101975
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624833746,419 - 748,845 (-)NCBI
RefSeq Acc Id: XM_021246317   ⟹   XP_021101976
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624833746,419 - 748,837 (-)NCBI
Protein Sequences
Protein RefSeqs XP_012921884 (Get FASTA)   NCBI Sequence Viewer  
  XP_021101975 (Get FASTA)   NCBI Sequence Viewer  
  XP_021101976 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000026934
  ENSHGLP00100009745
GenBank Protein JAO01636 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_021101975   ⟸   XM_021246316
- Peptide Label: isoform X1
- UniProtKB: A0A0P6JFV2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012921884   ⟸   XM_013066430
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021101976   ⟸   XM_021246317
- Peptide Label: isoform X2
Ensembl Acc Id: ENSHGLP00000026934   ⟸   ENSHGLT00000027173


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000019155 Ensembl, ENTREZGENE
  ENSHGLG00100007224 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000027173 ENTREZGENE
  ENSHGLT00100009856 UniProtKB/TrEMBL
InterPro DUF4642 UniProtKB/TrEMBL
NCBI Gene CUNH2orf74 ENTREZGENE
PANTHER HYPOTHETICAL PROTEIN LOC690352 UniProtKB/TrEMBL
  PTHR37882 UniProtKB/TrEMBL
Pfam DUF4642 UniProtKB/TrEMBL
UniProt A0A0P6JFV2 ENTREZGENE, UniProtKB/TrEMBL